KEGG   Rattus norvegicus (rat): 56824
Entry
56824             CDS       T01003                                 
Symbol
Ifit1
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1-like protein
  KO
K14217  interferon-induced protein with tetratricopeptide repeats 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    56824 (Ifit1)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_11 TPR_12 TPR_14 TPR_17 TPR_19 TPR_16 ANAPC3 TPR_MalT TPR_15 TPR-S ANAPC5
Other DBs
NCBI-GeneID: 56824
NCBI-ProteinID: NP_064481
RGD: 620599
Ensembl: ENSRNOG00000019050
UniProt: Q9JJT1
Position
1:241565197..241567262
AA seq 463 aa
MGENAGGDQVMENLLQLRCHFTWGLLFEKNDIPDLEVRISEQVQFLDIKNSLGMHNLQAY
VRHLKGEQEEALQSLKEAEALIEGEQLGKRSLVTWGNCAWVHYHRGSLAEAQIYLDKVEN
VCREFSSPFRYRMECAEIDCEEGWALLKCGGSNYMRAMACFAKALQVDPENPEYNAGYAV
VAYRQDFDDNHVSLEPLRKAVRLNPEDPHLKVLLALKLQDLGEQDEAETHIEEALSSTSC
QSYVFRYAAKYFRRKGDINEALHLLHRALQTSPSSGYLHYQKGLCYKQQMIQLKTSGNRQ
ARRQENIQELAHQAICEFQETLNLRPTFEMAYVCMAEMQAEIGQYEEAEGNFQEALNLNN
LVAHIEQDIHFRYGRSQQFHKKSEDKAITHYLKGLKLEEKSFAWRKLLTALEKVAERRVR
QNVRLVESTSLLGLVFKLKGQEMKALLYYEKALRLSGEMNPAF
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgggagagaatgctggtggtgaccaggtcatggagaatctgcttcagctgagatgtcac
ttcacatggggcctgctcttcgaaaaaaatgacatacctgatttggaagtgaggatctca
gagcaggtccagttccttgacatcaagaactcactggggatgcacaacctccaggcctac
gtgagacacctgaaaggtgagcaggaggaagccctgcagagcttgaaagaggctgaagcc
ttgatcgagggagagcagttgggcaagagaagcctggtgacctggggcaactgtgcctgg
gtgcattaccacaggggcagcttggcagaagcccagatctacctggacaaggtggagaat
gtttgcagggaattctcaagtcccttccgctacaggatggagtgtgctgagatagactgt
gaggaaggctgggccttgctgaagtgtggaggaagtaactatatgcgagccatggcctgc
tttgcaaaggctctgcaggtggacccagaaaaccctgagtacaatgctggctatgcagtt
gtggcctatcgccaagatttcgatgacaaccatgtttctctagaacctctaaggaaggct
gtcaggttaaatccagaagatccacaccttaaagttctccttgctctaaagcttcaggat
ttaggggaacaagatgaagcagaaacacacattgaagaagccctcagcagcacatcttgc
caaagctatgtctttcgctacgcagccaaatatttccgccggaaaggtgacataaacgaa
gctcttcatcttctacacagggccttgcagacgtcaccttcctctggctacctacattac
caaaaagggctctgttacaagcaacagatgatccaactgaagacatctggaaacaggcag
gccagaaggcaggagaatatacaggaattggcacatcaggccatttgtgaatttcaagag
actttgaatctgaggcccacatttgagatggcttacgtttgcatggctgaaatgcaggca
gaaattggccaatatgaagaagcagagggaaatttccaggaggccctgaacctcaacaac
cttgtagcccacatagagcaggatattcatttccgctacggccgttcccaacaatttcat
aagaagtcagaagacaaggcaatcactcactacttaaaaggtctaaaactagaagagaag
tcctttgcctggaggaaactactcacagctttggagaaagtggctgaaagacgtgttcgc
cagaatgtccggcttgtggagagcaccagccttcttggactggtcttcaaactgaaaggg
caggagatgaaggccctgctttactatgagaaggccctgaggctctctggggaaatgaac
cctgcattttga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (27)   

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