KEGG   Rattus norvegicus (rat): 56827
Entry
56827             CDS       T01003                                 
Symbol
Cacna1i
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
  KO
K04856  voltage-dependent calcium channel T type alpha-1I
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04020  Calcium signaling pathway
rno04713  Circadian entrainment
rno04925  Aldosterone synthesis and secretion
rno04927  Cortisol synthesis and secretion
rno04929  GnRH secretion
rno04934  Cushing syndrome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    56827 (Cacna1i)
   04020 Calcium signaling pathway
    56827 (Cacna1i)
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    56827 (Cacna1i)
   04925 Aldosterone synthesis and secretion
    56827 (Cacna1i)
   04927 Cortisol synthesis and secretion
    56827 (Cacna1i)
  09159 Environmental adaptation
   04713 Circadian entrainment
    56827 (Cacna1i)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    56827 (Cacna1i)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    56827 (Cacna1i)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   56827 (Cacna1i)
SSDB
Motif
Pfam: Ion_trans PKD_channel
Other DBs
NCBI-GeneID: 56827
NCBI-ProteinID: NP_064469
RGD: 68944
Ensembl: ENSRNOG00000060407
UniProt: Q9Z0Y8
Position
7:113716266..113827670
AA seq 2199 aa
MADSNLPPSSAAAPAPEPGITEQPGPRSPPPSPPGLEEPLEGTNPDVPHPDLAPVAFFCL
RQTTSPRNWCIKMVCNPWFECVSMLVILLNCVTLGMYQPCDDMECLSDRCKILQVFDDFI
FIFFAMEMVLKMVALGIFGKKCYLGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRV
LRPLKAINRVPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFLE
ENFTIQGDVALPPYYQPEEDDEMPFICSLTGDNGIMGCHEIPPLKEQGRECCLSKDDVYD
FGAGRQDLNASGLCVNWNRYYNVCRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEI
MYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSS
STVASYAEPGDCYEEIFQYVCHILRKAKRRALGLYQALQNRRQAMGPGTPAPAKPGPHAK
EPSHCKLCPRHSPLDPTPHTLVQPISAILASDPSSCPHCQHEAGRRPSGLGSTDSGQEGS
GSGGSAEAEANGDGPQSSEDGVSSDLGKEEEQEDGAARLCGDVWRETRAKLRGIVDSKYF
NRGIMMAILVNTVSMGIEHHEQPEELTNILEICNVVFTSMFALEMILKLAAFGLFDYLRN
PYNIFDSIIVIISIWEIVGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNV
ATFCMLLMLFIFIFSILGMHIFGCKFSLRTDTGDTVPDRKNFDSLLWAIVTVFQILTQED
WNVVLYNGMASTTPWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDEDQSS
SNLEEFDKLPEGLDNSRDLKLCPIPMTPNGHLDPSLPLGAHLGPAGTMGTAPRLSLQPDP
VLVALDSRKSSVMSLGRMSYDQRSLSSSRSSYYGPWGRSGTWASRRSSWNSLKHKPPSAE
HESLLSGEGGGSCVRACEGAREEAPTRTAPLHAPHTHHAHHGPHLAHRHRHHRRTLSLDT
RDSVDLGELVPVVGAHSRAAWRGAGQAPGHEDCNGRMPNIAKDVFTKMDDCRDRGEDEEE
IDYTLCFRVRKMIDVYKPDWCEVREDWSVYLFSPENKFRILCQTIIAHKLFDYVVLAFIF
LNCITIALERPQIEAGSTERIFLTVSNYIFTAIFVGEMTLKVVSLGLYFGEQAYLRSSWN
VLDGFLVFVSIIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLIS
SLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNRSDCVAANYRWVHHKY
NFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNHNPWMLLYFISFLLIVSFF
VLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRLPYYATYCPTRLLIH
SMCTSHYLDIFITFIICLNVVTMSLEHYNQPTSLETALKYCNYMFTTVFVLEAVLKLVAF
GLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNDENPCEGMSRHATF
ENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDERSCLSSLQFVSPLYFVSFVLTAQFVL
INVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLGPCPGPCPGPCPCPCPCPCPGPR
LPTSSPGAPGRGSGGAGAGGDTESHLCRHCYSPAQETLWLDSVSLIIKDSLEGELTIIDN
LSGSVFHHYASPDGCGKCHHDKQEVQLAETEAFSLNSDRSSSILLGDDLSLEDPTACPQG
PKESKGELEPPEPMQAGDLDECFFPFASEPVSTGPESLLCEMGAIPFNPVQSWLKHESSQ
APQSPFSPDGSSPLLQMPAEFFHPAVSASQKGQEPGMSAGTLPKIALQGSWASLRSPSVN
CTLLRQATVSDASLDASPSSSAGSLQTTLEDSLTLSDSPRRALGPPVQVPGPRASLSPAT
RRRLSLRGRGLFSLRGLRAHQRSHSSGGSTSPGCTHHDSMDPSDEEGRGGAGGGGAGSEH
SETLSSLSLTSLFCLPPTLPPPGLTPARKFNSTSSLAAGPGRPGSTVSARGLVRSPSWAA
DRSKDPPGQAQLVSGLGSSAPGPQPPPGESTDAASKRKR
NT seq 6600 nt   +upstreamnt  +downstreamnt
atggctgacagcaacttaccgccctcatctgcagcagccccggcccctgagccgggaatc
actgagcagccggggccccggagtccccctccatcccctccaggcctggaggagccattg
gaaggaaccaaccctgacgtcccacatccagacctggctcctgttgctttcttctgcctg
cgccagaccacgagcccacggaactggtgcatcaagatggtttgtaacccgtggttcgag
tgtgtgagcatgctggttattctgctgaactgtgtgaccctgggcatgtaccagccatgt
gatgacatggagtgcctgtcggaccgttgcaagatcctgcaggtcttcgatgacttcatc
ttcatcttctttgccatggagatggtgcttaagatggtggccctgggcatttttggcaag
aagtgctacctcggagacacatggaaccgcctggatttcttcattgtcatggcagggatg
gttgagtactctctggacctacagaacatcaacctgtcagccatccgcactgtgcgtgtc
ctgaggcctctcaaagccatcaaccgtgtacccagcatgcggatcctggtgaacctgctg
ctcgacacgctgcccatgctggggaacgtgctcctgctctgtttcttcgtcttcttcatc
ttcggcatcattggcgtgcagctctgggcaggcctgctacggaaccgctgcttcctggaa
gagaacttcaccatacaaggggatgtggccctgcccccttattaccaaccagaggaggat
gacgagatgccctttatctgctccctgactggggacaatggcatcatgggctgccacgag
atccccccactgaaggagcagggccgggaatgctgcctgtccaaagatgatgtgtatgac
ttcggggcggggcgccaggacctcaacgccagcggtctgtgcgtcaactggaaccgctac
tacaacgtctgccgcacgggcaacgccaaccctcacaagggcgccatcaactttgacaac
attggctatgcctggattgtgattttccaggtgatcactctggaaggctgggtggagatc
atgtactatgtgatggacgcacattctttctacaacttcatctacttcattctgctcatc
atagtgggctccttcttcatgatcaacttgtgcctcgttgtcatagcaacccagttctct
gagaccaagcaacgggagcaccggctgatgctggagcaacgccagcgctacctgtcctcc
agcacggtggccagttacgctgagcccggtgattgctatgaggagatcttccaatatgtc
tgtcacatccttcgcaaagccaagcgccgtgccctaggcctctaccaggccctgcagaac
cggcgccaggccatgggcccggggacaccagcccctgccaagcctgggccccatgccaag
gagcccagccactgcaagctgtgcccacgacacagccccctggaccccactccccacaca
ctggtgcagcccatctctgccattctggcctctgaccccagcagctgccctcactgccag
cacgaggcaggcaggcggccctctggcctgggcagcactgactcaggccaggaaggctca
ggttctggtggctctgcagaggccgaagccaatggggatggaccccagagcagtgaggat
ggggtctcctcggacctggggaaggaggaggaacaggaggacggggcagcccgactgtgt
ggggatgtgtggcgcgagacacgagccaagctgcggggcatcgtggacagcaagtacttc
aacagaggtatcatgatggctatcctggtgaacacagtcagcatgggcatcgagcaccac
gaacagcccgaggagctgaccaacatcctggagatctgcaatgtggtcttcaccagtatg
tttgccctggagatgatcctgaaactggccgcctttgggctcttcgactacctgcggaac
ccttacaacatctttgacagcatcatcgtcatcatcagcatctgggaaatcgtggggcag
gcagacggtggcctgtctgtgctgcgcaccttccggttgctgcgggtgctgaagctggtg
cgcttcatgccggcgctgcggcgccagctcgtggtgctcatgaagaccatggacaacgtg
gccaccttctgcatgctactcatgctgttcatcttcatcttcagcatccttgggatgcat
atctttggctgcaaattcagcctccgcacggacacgggagacaccgttcctgacaggaag
aacttcgattccttactgtgggccatcgtcacagtgttccagatcctcactcaggaggac
tggaacgttgtcctgtacaatggcatggcctccaccaccccctgggcctccctctatttt
gttgccctcatgacctttggcaactacgttctcttcaatctcctggtggctatcctggta
gagggtttccaggctgagggtgatgctaatcgttcctactctgatgaggaccagagctca
tccaatttggaggagtttgacaagctcccagagggcctggacaacagtagagatctcaag
ctctgcccaatacccatgacacccaatggacacctggaccctagcctccctctgggtgcg
catctgggtcctgctggtaccatgggtactgccccccgcctctcactgcagccagacccg
gtactggtggccctagactctcggaaaagcagtgtcatgtccctgggcaggatgagctat
gatcagcgatccttgtccagctcccggagctcctactacgggccctggggccgcagtggg
acctgggctagccgccgctccagctggaacagcctgaaacacaagccgccctcagctgag
catgagtccttactgtctggggagggtggaggtagctgcgtcagggcctgtgaaggcgcc
cgggaggaggcgccaactcgcaccgcacccctgcatgctccacacacgcaccacgcgcac
catggaccccacctggcacaccgtcaccgacaccaccgccggactctgtcccttgatacc
agggactctgttgacctgggagagctggtgcccgtggtgggtgcccactcacgggccgct
tggaggggggcgggtcaggcccctgggcacgaggactgcaatggcagaatgcccaacata
gccaaggatgtcttcaccaagatggatgactgccgcgaccgcggggaggacgaggaggag
atcgactataccctgtgtttccgggtccgcaagatgattgatgtgtacaagccggactgg
tgcgaagtccgcgaggactggtcggtctacctcttctcccccgagaacaagttccggatc
ctgtgtcagactatcattgctcacaagctttttgactacgtggtcttggcctttatcttc
ctcaactgtatcaccattgctctggagagaccccagattgaagctggtagcactgagcgc
atcttcctcacggtgtctaactacatcttcacagccatcttcgtgggcgagatgacactg
aaggtggtttctctgggcctgtactttggtgagcaggcgtacctgcgtagcagctggaat
gtactggatggtttcctggtctttgtgtccatcatcgatatcgtagtgtccgtggcctct
gctgggggagccaagattctgggggtcctccgggtcctgcggctcctgcgtaccttacgt
cctttgagggttatcagccgggcccctgggctgaagctggtggtagagacgctcatctcc
tccctcaagcccattgggaacatcgtcctcatctgctgtgccttcttcatcatcttcggc
atcctgggggtgcagcttttcaaaggcaagttctaccattgtttgggagtggacacccga
aacatcaccaaccgatctgactgcgtggcggccaactaccgctgggtgcatcacaaatac
aactttgacaacctgggccaggcattgatgtccctctttgtcttggcctccaaggacggc
tgggtgaacatcatgtataatggattagatgctgttgctgtggaccagcagccagtgacg
aaccacaacccctggatgctactgtacttcatttcgttcctgctcatcgtcagcttcttt
gtgctcaacatgtttgtgggcgtggtcgtggagaacttccacaagtgccggcagcaccag
gaggctgaggaggcgcggaggcgtgaggagaaacggctgcggcgcctggaaaagaagcgc
cgtaaggctcagaggctgccctactatgctacctactgtcccacaaggctgctcatccac
tccatgtgcaccagccactacctggacatcttcattaccttcatcatctgcctcaatgtt
gtcaccatgtccctggagcactacaaccagcctacatccctagagacagcccttaagtac
tgcaactacatgttcaccactgtctttgtgctggaggctgtgctgaagctggtggcattt
ggcctgaggcgtttcttcaaggaccgatggaaccagctggacctggccattgtgctgctg
tccgtcatgggcatcacactggaggagatcgagatcaatgccgcccttcccatcaacccc
accatcatccgtatcatgcgtgttctgcgtatcgcccgggtgttgaagctattgaagatg
gccacaggaatgcgggccctgctggacacagtggtacaggctctgccccaggtgggcaac
ctgggcctgctcttcatgctgctcttcttcatctatgctgctctgggagtggagctcttc
ggaaagctggtctgcaatgacgagaacccgtgtgagggcatgagccggcacgccaccttt
gaaaacttcggcatggccttcctcacgctcttccaggtctccacaggcgataactggaat
ggaattatgaaggacaccctgcgagactgtacccatgatgagcgcagctgcctaagcagc
ctgcagtttgtgtcaccgctctactttgtgagcttcgtgctcacagctcagttcgtgctc
atcaacgtggtggtggccgtgctgatgaaacatctggatgacagcaacaaggaggcccag
gaggatgcagagatggatgctgagatcgagctggagatggcccatggcctcggcccctgc
cctggcccctgccctggtccctgcccctgcccctgcccctgcccctgtcctggcccgagg
ctgcccactagttcacctggggctccggggcgaggatcgggaggggcaggtgctggaggc
gacaccgagagtcacctgtgccggcactgctattctccagcccaggagaccctgtggctg
gacagcgtctctttaatcatcaaggactccttggagggggagctgaccatcattgacaac
ctgtctgggtccgtcttccaccactacgcctcacctgacggctgtggcaagtgtcaccat
gacaagcaagaggtgcagctggctgagacagaggccttctccctgaactcagacaggtct
tcatccatcctgctgggggatgacctgagtcttgaggaccccacggcctgcccacagggc
cccaaggagagcaagggtgaactagagcctccggagcccatgcaggctggagacctggat
gaatgctttttcccctttgccagtgagccagtgtccacaggcccagagagcctgctgtgc
gagatgggggccattccattcaaccctgtccagtcctggctcaaacacgagagcagccaa
gcaccccagagccctttctccccggatggctccagccctctcctgcagatgcctgctgag
ttcttccaccctgctgtgtctgccagccagaaggggcaggaaccgggcatgagtgcagga
accctgcccaagattgcacttcaggggtcctgggcatcgctgaggtcaccgagtgtcaac
tgcaccctcttgcgccaggctactgtgagtgacgcgtccttggatgccagtcctagcagc
tcagcgggcagcctacagaccacactggaagacagtctgactctgagtgacagtccccgg
cgtgccctggggccgccggtccaggtgcctgggccacgggctagcctgtcaccggccacc
cggcgccgcctcagcctgcggggccgtggcctgtttagtctgcgtgggctgcgggcccat
cagcgtagccacagcagtggcggctccaccagccctggctgcactcaccacgactccatg
gacccctctgatgaggagggccgcgggggcgcaggtggcgggggtgcaggcagtgagcac
tcggagaccctcagcagcctgtcactcacatctctcttctgcctaccacccacgctgcca
ccacccggcctcaccccagccaggaagttcaacagtaccagcagcctggccgctggacct
ggccgtcctggctccactgtctcagcccgtggtctggtcagaagcccctcatgggctgca
gaccgcagcaaggacccaccaggccaagctcagctggtctcaggcttgggctcctcagca
cccgggccacagccacctcccggggagtcaactgatgctgcgagcaaaaggaagagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (21)   
   RefSeq(nuc) (5)   
   GenBank (8)   
   EMBL (8)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system