KEGG   Rattus norvegicus (rat): 58817
Entry
58817             CDS       T01003                                 
Symbol
Sec23a
Name
(RefSeq) protein transport protein Sec23A
  KO
K14006  protein transport protein SEC23
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    58817 (Sec23a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58817 (Sec23a)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    58817 (Sec23a)
SSDB
Motif
Pfam: Sec23_trunk Sec23_helical Sec23_BS Gelsolin zf-Sec23_Sec24 APP_E2
Other DBs
NCBI-GeneID: 58817
NCBI-ProteinID: NP_001099202
RGD: 1309103
Ensembl: ENSRNOG00000004657
UniProt: F7F6X6 B5DFC3
Position
6:complement(82393699..82442594)
AA seq 765 aa
MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL
CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYV
VLRGPQMPLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC
EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL
TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM
VVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM
KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSREIKISGAI
GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAVQ
FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP
DVLRWLDRQLIRLCQKFGEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES
SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH
GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS
KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgacaacctatttggaatttatccaacaaaatgaagaacgagacggggtcaggttcagt
tggaatgtttggccatctagtcgtctggaagctacaagaatggttgttccagtggcagcc
ctgtttacacctttgaaggagagacctgacttaccacccattcagtacgagcctgtcctg
tgcagtaggacgacttgccgtgcagttttgaatcctttatgtcaagttgattatcgagca
aaactctgggcttgcaacttttgttaccaaaggaatcagtttccacctacatatgctggg
atatctgaattgaaccagcctgccgagcttttaccccagttttcaagcattgaatatgta
gttctgcgtggtccccagatgcctttgatatttctctatgtggttgatacttgcatagag
gatgaagatttacaggctctgaaggaatccatgcagatgtcgttgagccttttgccacct
acagctttggttggccttattacttttgggagaatggtgcaggttcatgagcttggatgt
gaaggcatttcaaaaagctatgtcttcagaggaacaaaggatctgtctgccaaacaactg
caggaaatgctggggctctctaaagtacctgttactcaggccacccgtggtcctcaggta
cagcaaccacctccttccaatagattcttacagccagtacagaaaatagacatgaatctc
acagatcttctgggggaacttcagcgagacccttggcctgtaccacaaggaaagagacct
ttgcgttcctcaggagtggcgctttctatagctgtaggactgcttgagtgtacgttccca
aacactggcgcgcggatcatgatgttcattggtggccctgctacccaggggcctgggatg
gtggttggagatgagctaaagacacctataagatcctggcacgacattgaaaaggacaat
gccaaatatgttaaaaagggaaccaagcattttgaagcactggctaatcgagctgctacg
acagggcatgtcattgatatctacgcctgtgcactagatcagacaggtctcttggagatg
aagtgctgccctaaccttactggaggatacatggtaatgggtgactctttcaatacctcc
ttattcaagcaaacttttcaaagagtcttcaccaaagatatacatggccagtttaaaatg
ggctttggtggcacattagagataaagacctcaagggaaataaagatttcaggagctatc
ggtccctgtgtgtctcttaattctaaaggaccttgcgtgtctgaaaatgagattggaaca
ggtggcacttgtcagtggaagatatgtggacttagtcccactacaaccttagccatatat
tttgaagttgttaatcagcataatgctccaattccccaaggagggcgaggtgcagtccag
ttcgtgacccagtatcagcactcaagtgggcagagacgcatccgagtgaccacgattgct
aggaactgggcagatgctcaaactcagatccagaacattgctgcatcttttgaccaggaa
gcagctgccattctcatggctaggttggcaatatacagagcggagacagaggaagggcca
gacgtgcttaggtggttggatagacagctcattcgactgtgtcagaaatttggagagtat
cacaaagatgatccaaattccttccggttttcagaaacattttccctttatccacagttt
atgtttcatttaagaagatctcccttcttgcaagtttttaacaacagtcctgatgagagt
tcatactatcgccaccatttcatgcgccaggatctgacacagtctctaatcatgatccag
cccattctgtatgcctattccttcagtggcccaccagagccggtgcttctcgatagcagc
agcattctcgcagatcgaattctcctcatggacacgtttttccagatcctgatttatcac
ggtgagactatagcacagtggcggaagtctggataccaggacatgccagaatatgaaaat
ttccgacacctcctgcaagccccagtagatgacgcacaagagattcttcactccagattc
cccatgccgagatacattgacaccgagcatggtggcagccaggcacgtttccttctttca
aaagtcaacccttcacagactcataataacatgtatgcctgggggcaggagtccggagca
ccaatcctcacagatgatgttagcttacaagtgttcatggatcatttgaagaaacttgct
gtgtcaagtgctgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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