KEGG   Rattus norvegicus (rat): 58852
Entry
58852             CDS       T01003                                 
Symbol
Nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03320  PPAR signaling pathway
rno04148  Efferocytosis
rno04931  Insulin resistance
rno04932  Non-alcoholic fatty liver disease
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    58852 (Nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    58852 (Nr1h3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    58852 (Nr1h3)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    58852 (Nr1h3)
   04931 Insulin resistance
    58852 (Nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    58852 (Nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rno03310]
    58852 (Nr1h3)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    58852 (Nr1h3)
Nuclear receptors [BR:rno03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   58852 (Nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 58852
NCBI-ProteinID: NP_113815
RGD: 61909
Ensembl: ENSRNOG00000013172
UniProt: A6HNB4 A6HNB3
Position
3:complement(97614616..97632053)
AA seq 445 aa
MSLWLEAAVPDVSPDSATELWKTEPQDAGDQGGNTCILREEARMPQSTGGALRIGLESSE
PTALLPRAETLPEPTELRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFF
RRSVIKGARYICHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQ
EEEQAQATSVSPRVSSPPQVLPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPIAP
DPQSREARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLET
SRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRSMNELQLNDAEFALLIAI
SIFSADRPNVQDQLQVERLQHTYVEALHAYVSINHPHDRLMFPRMLMKLVSLRTLSSVHS
EQVFALRLQDKKLPPLLSEIWDVHE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtccttgtggctggaggccgcagtgcctgatgtttctcctgactctgcaacggagttg
tggaagacagaacctcaagatgcaggagaccagggaggcaacacttgcatccttagggag
gaagccaggatgccccaatcaactgggggtgctttaaggatagggttggagtcatccgag
cctacagccctgctccccagggcagagaccctcccagagcctacagaacttcgtccacag
aagcggaaaaaggggccagcccccaaaatgctggggaacgagctatgcagtgtatgtggg
gacaaggcctctggcttccattacaatgtgctgagctgcgagggctgcaagggattcttc
cgccgcagtgtcatcaagggagcacgctacatttgccatagcggtggccactgccccatg
gacacctacatgcggcggaaatgccaggagtgtcgccttcgcaaatgccgccaggcaggc
atgagggaggagtgtgtcttatcagaagaacagatccgcttgaagaaactgaagcgtcaa
gaagaggagcaggctcaagccacatcggtgtccccaagggtttcctcaccgccccaggtc
ctgccacagctcagcccagaacaactgggcatgattgagaagttggtggctgcccagcaa
cagtgtaacaggcgctccttctctgaccgacttcgagtcacgccttggcccattgcaccc
gaccctcagagccgggaagcccgccaacagcgctttgcccactttactgagctggccatc
gtgtccgtgcaggagattgttgactttgccaaacagctccctggcttcctacagctgagc
agggaggaccagatcgccttgctgaagacctctgcgatcgaggtgatgcttctggagaca
tcgcggaggtacaaccctgggagtgagagcatcaccttcctcaaggatttcagttacaac
cgggaagactttgccaaagcagggctgcaggtggagttcattaaccccatctttgagttc
tccagatccatgaatgaactgcaactcaatgatgctgaatttgctctgctcatagccatc
agcatcttctctgcagaccggcccaacgtgcaggaccagctccaagtagagagactgcaa
cacacatatgtggaggccctgcatgcctatgtctccatcaaccacccccacgaccgactg
atgttcccacggatgctaatgaagctggtgagcctccggactttgagcagcgtccattca
gagcaagtgtttgcacttcgcctgcaggacaaaaaacttccccctctgctctccgagatc
tgggatgtccacgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (2)   
   RefSeq(pep) (11)   
DNA sequence (17)   
   RefSeq(nuc) (11)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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