KEGG   Rattus norvegicus (rat): 58856
Entry
58856             CDS       T01003                                 
Symbol
Ddx25
Name
(RefSeq) ATP-dependent RNA helicase DDX25
  KO
K18656  ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    58856 (Ddx25)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     58856 (Ddx25)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     58856 (Ddx25)
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 58856
NCBI-ProteinID: NP_113818
RGD: 68381
Ensembl: ENSRNOG00000012260
UniProt: Q9QY16
Position
8:complement(42152046..42168635)
AA seq 483 aa
MASLLWGGDAGAAESERLNSHFSNLVHPRKNLRGIRSTTVPNIDGSLNTEEDDDEDDVVD
LAANSLLNKLIRQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRP
SKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLCLAPTYELA
LQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTKQIVIGTPGTVLDWCFKRKLIDLTK
IRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAERIIPDPNVI
KLRKEELTLNNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQ
DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQS
EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQLDPEDMDEIEK
IEY
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggcgtcgttactttggggaggcgacgctggggcggcggagagcgagcggctgaacagc
cacttttcaaatctcgtccaccccaggaagaaccttcgtggtattaggagtaccacagtc
ccaaacatagacggctctcttaacacggaagaagatgatgacgaagacgatgtagtggat
ttggcagccaattcactcttaaacaagttaatccgccagtccttagtagaatccagccac
cgagtggaagtcttacaaaaggatcccagctctccactctactcggtgaaaacatttgaa
gagctacgactaaaggaagagttactaaaagggatttatgcaatgggatttaaccgacca
tccaaaatccaagagatggccctccccatgatgctcgcacatcctccccagaacctcata
gcacagagccagtccggcacaggaaaaaccgctgcctttgtcttagcgatgctaaacaga
gtgaatgccttggaattgtttccacagtgcctctgcctggctcccacctatgaactggct
ctgcagaccggccgcgtggttgaaagaatggggaaattctgtgtggatgttgaagtgatg
tacgccattcgaggaaaccgaattcctaggggcaccgacgtcaccaaacagattgtcatc
ggcactcctgggactgtcctagactggtgcttcaagcggaaactgattgacttgacaaag
atccgtgtgtttgtcctggatgaagcagatgtgatgattgacacccaaggattctccgat
cagagcatccgtatccaaagagctttaccctctgaatgccagatgctcctcttttcagca
acctttgaggactctgtgtggcagtttgctgaacgaatcattcctgaccccaatgttatc
aagttgcgaaaagaggaactgaccctgaacaacatccggcagtattacgtgttgtgtgag
aacaggaaagacaaataccaagccctctgtaatatctacggtggcatcaccattggccaa
gccatcatcttctgccagacgcgtcggaatgccaagtggctgacagtggagatgatgcag
gatggccaccaggtgtccctgctaagtggagaactcacggtggagcagcgggcttccatc
attcagaggttccgagatggcaaagagaaggttctcataacaaccaatgtctgtgctcga
ggaatcgatgtgaagcaggtcaccatcgttgtgaactttgacctccctgtaaaccagtca
gaagagccagactatgagacctacctccaccgtatagggcggacgggacgctttgggaaa
aaaggtctcgccttcaacatgattgaagtggataagctgcccctgctcatgaaaatacaa
gaccacttcaatagcagtattaagcagctggacccagaagacatggatgagattgaaaag
atcgaatattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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