KEGG   Rattus norvegicus (rat): 58857
Entry
58857             CDS       T01003                                 
Symbol
Vapa
Name
(RefSeq) vesicle-associated membrane protein-associated protein A
  KO
K06096  vesicle-associated membrane protein-associated protein A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04979  Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    58857 (Vapa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58857 (Vapa)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    58857 (Vapa)
SSDB
Motif
Pfam: Motile_Sperm bZIP_1 ASH YabA
Other DBs
NCBI-GeneID: 58857
NCBI-ProteinID: NP_113819
RGD: 61803
Ensembl: ENSRNOG00000014765
UniProt: Q9Z270 A6JRB7
Structure
Position
9:complement(112624791..112654731)
AA seq 249 aa
MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYC
VRPNSGVIDPGSIVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDE
LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECK
RLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVVIAAIFI
GFFLGKFIL
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgtccgcctccggggccatggcgaagcacgagcagatcctggtcctcgaccctcct
tcagacctcaaattcaaaggccccttcacagatgtagtcactacaaatcttaaattgcag
aatccatcggacagaaaagtgtgtttcaaagtgaagaccacagcgccccgccggtactgc
gtgcggcccaacagtggggttattgacccagggtcaatcgtgactgtctcagtaatgctg
cagccctttgactatgatccgaacgaaaagagtaaacataagttcatggtacagacaatt
tttgctccaccaaacatttcagatatggaagctgtgtggaaagaggcaaaacctgacgaa
ctaatggattctaaactgagatgtgtatttgagatgccgaatgaaaacgataagctgaac
gacatggaacctagcaaagctgtcccactgaatgcatccaagcaagatggacccctgcca
aaaccacatagtgtttcactcaatgacacggagacaaggaaactgatggaagagtgcaag
cgacttcagggagaaatgatgaagctctcagaagaaaaccgacacctgagagatgaaggc
ctacggctcagaaaggtagcacattcggataaacctggatccacctcagccgtgtccttc
agagataatgtcaccagtcctcttccttctcttctggttgtaattgcagccattttcatt
ggattctttctagggaaattcatcttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (17)   
   RefSeq(nuc) (5)   
   GenBank (6)   
   EMBL (6)   
3D Structure (2)   
   PDB (2)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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