KEGG   Rattus norvegicus (rat): 58920
Entry
58920             CDS       T01003                                 
Symbol
Gpc1
Name
(RefSeq) glypican-1 precursor
  KO
K08107  glypican 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05205  Proteoglycans in cancer
rno05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    58920 (Gpc1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    58920 (Gpc1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    58920 (Gpc1)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    58920 (Gpc1)
Proteoglycans [BR:rno00535]
 Cell surface proteoglycans
  Glypican family (GPI-anchored HSPG)
   58920 (Gpc1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Others
  58920 (Gpc1)
SSDB
Motif
Pfam: Glypican
Other DBs
NCBI-GeneID: 58920
NCBI-ProteinID: NP_110455
RGD: 61853
Ensembl: ENSRNOG00000049437
UniProt: P35053 Q6P7Q2
Position
9:100843645..100871458
AA seq 558 aa
MELRARGWWLLCAAAALVACARGDPASKSRSCSEVRQIYGAKGFSLSDVPQAEISGEHLR
ICPQGYTCCTSEMEENLANHSRMELETALHDSSRALQATLATQLHGIDDHFQRLLNDSER
TLQDAFPGAFGDLYTQNTRAFRDLYAELRLYYRGANLHLEETLAEFWARLLERLFKQLHP
QLLLPDDYLDCLGKQAEALRPFGDAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQV
PLAPECSRAVMKLVYCAHCRGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI
TDKFWGPSGAENVIGSVHMWLAEAINALQDNKDTLTAKVIQGCGNPKVNPHGSGPEEKRR
RGKLALQEKSSTGTLEKLVSEAKAQLRDIQDYWISLPGTLCSEKMAMSPASDDRCWNGIS
KGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRGAYGGNDVDFQD
ASDDGSGSGSGGGCPDDACGRRVSKKSSSSRTPLTHALPGLSEQEGQKTSAATRPEPHYF
FLLFLFTLVLAAARPRWR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggagctccgggcccgaggctggtggctgctgtgcgcggccgccgcgctagtcgcctgc
gcccgcggggaccccgccagcaagagccggagctgcagcgaagtccgccagatctacggg
gctaagggctttagcctgagcgacgtgccccaggcagagatctcgggagagcacctgcgg
atctgcccccagggctacacctgctgcaccagtgagatggaggagaacctggccaaccac
agccggatggagctggagaccgcactccacgacagcagccgtgccctgcaggctacgctg
gccacccagctgcatggcatcgatgaccacttccagcgcctgctgaatgactcggagcgt
acactgcaggatgcttttcccggggcctttggggacctgtacacgcagaacactcgggcc
ttccgggacctgtatgctgagctgcgtctctactaccgaggggccaacctacaccttgag
gagacactggccgagttctgggcacggctgctggagcgtctcttcaagcagctgcacccc
cagctgctgctgcccgatgactatctggactgcctgggcaagcaggcagaggcactgcgg
ccgtttggggatgcccctcgagaactgcgcctgagggccacccgtgcttttgtggcggca
cgatcctttgtgcagggcctgggtgtggccagtgacgtagtccgaaaggtggcccaggtt
cctctggccccagaatgttctcgggctgtcatgaagttggtctactgtgcccattgccgg
ggagtccctggtgcccggccctgtcccgactattgccgaaatgtgctcaaaggctgcctt
gccaaccaggccgacctggatgccgagtggaggaacctcctggactccatggtgctcatc
actgacaagttctggggcccgtcgggtgcggagaatgtcattggcagtgtgcatatgtgg
ctggcggaggccatcaacgccctccaggacaacaaggacacactcacagctaaggtcatc
cagggctgcggaaaccccaaggtcaatccccatggctctgggcctgaggagaagcgtcgc
cgtggcaaactggcactgcaggagaagtcctccacaggtactctggaaaagctggtctct
gaggccaaggcccagctccgagacattcaggactactggatcagcctcccagggacactg
tgtagtgagaagatggccatgagtcctgccagcgatgaccgctgctggaatgggatttcc
aagggccggtacctacctgaggtgatgggtgatgggctggccaaccagatcaacaaccct
gaagtggaggtggacatcaccaagccggatatgaccatccggcagcagatcatgcagctc
aagatcatgaccaaccgtttacgtggcgcctacggtggcaatgatgtggacttccaggat
gccagtgatgacggcagtggctccggcagcggtggcggatgcccagatgacgcctgtggc
cggagggtcagcaagaagagctccagctcccggacccccttgacccatgccctccccggc
ttgtcagaacaggagggacagaagacctcggccgccactcgcccagagcctcactacttc
tttctgctcttcctgttcaccttggtccttgctgcagccaggcccaggtggcggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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