KEGG   Rattus norvegicus (rat): 58923
Entry
58923             CDS       T01003                                 
Symbol
Mefv
Name
(RefSeq) pyrin
  KO
K12803  pyrin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04621  NOD-like receptor signaling pathway
rno04623  Cytosolic DNA-sensing pathway
rno05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    58923 (Mefv)
   04623 Cytosolic DNA-sensing pathway
    58923 (Mefv)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    58923 (Mefv)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58923 (Mefv)
Membrane trafficking [BR:rno04131]
 Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    58923 (Mefv)
SSDB
Motif
Pfam: PYRIN zf-B_box SpoVR Mlp
Other DBs
NCBI-GeneID: 58923
NCBI-ProteinID: NP_113822
RGD: 61889
Ensembl: ENSRNOG00000008134
UniProt: Q9JJ25
Position
10:12288514..12303337
AA seq 749 aa
MANTRVDHLLNTLEELLPYELEKFKFKLHTTSLEKGHSRIPLSLVKMARPIKLTRLLLTY
YGEEYAVRLTLQILRATNQRQLAEELHKATGPEHLTEENGVGGSVQSSAENKDKGVKGSD
VPGEDEAQQNDDESDILPPIQAEVGKGPQKKSLAKRKDQRGPESLDSQTKPGARSAAPLY
RRTLVTQSPGDKENRAGAQLRRNASSAGRLQGLYSNVPGRREIKKAEVYLPSGKKRPRSL
EITTYSKEGEPPNSEALPTQEETRNGSLIRTRTATLNGRTTGTLEKGVGIPEHSMMLDEE
TSRNMSSKISLTREKRCTASWTENGNGGPETPETLGETVSSILCDSCSPKVLLSLGEKLA
QTPEDPASLGQAASKGRSRDKVACPLCHTQGELPAKACVQSSCSCSVAPGDPKASGRHSI
CFQCQSSRAGKSCEAQSPQFLPQCPRHMKQVQLLFCEDHREPICLICRLSQEHQGHRVRP
IEEAALQYKEQIRKQLERLREMRGYVEEHKLPADKKAEDFLKQTETQKQRISCPLEKLFQ
FLEQQEQLFVTWLQELVQTIGKVRETYYTQVSLLDKLIGELEAKQDQPEWELMQDIGATL
HRAETMTASELLGIPPGVKEKLHLLYQKSKSAEKNMQRFSEMLGSEMAFSASDVATREGC
RPSTTKAQALIPTVHLKCDGAHTQDFDVILCAELEAGGSEPQDYLHPSSAQDTPELHEIH
SQNNKRKFKSFLKWKPSFSRTDRCLRTCW
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggccaatacccgtgttgaccatctgctaaacaccctggaggagctgctgccctatgaa
ctagagaaattcaagtttaagttgcacaccaccagcctggagaagggccactctaggatc
cccctgagcctcgtgaagatggccaggccaataaagctgaccagactcctgctaacctac
tatggggaagaatatgctgtaaggctgaccctgcagatcctgcgggccaccaaccagcgc
caactagcagaggagcttcacaaggccacaggcccagaacatttgactgaagaaaatgga
gttggcggttctgtgcagtcttctgcagagaataaggacaagggtgtgaagggatcagat
gtccctggagaggatgaggcacagcagaacgatgatgaatcagacatcctgccacccatc
caggcagaagtggggaaggggccccagaagaaatcactggccaaaaggaaggatcagagg
ggccctgagagcctggactcacagaccaagccaggggccaggagtgcagcaccactctat
aggagaaccctggtgacccagtccccaggggacaaggagaacagagcgggtgctcagctc
cgcaggaatgccagctctgcagggaggctgcaaggactctacagcaatgtcccagggagg
agagagatcaagaaggctgaagtgtatttgccttcaggaaagaagcgacccaggagtctt
gaaattaccacttactcaaaagaaggagaacccccaaattcagaagctcttccgactcaa
gaggaaacaagaaatggcagtctcattcgtacgagaacagccaccctgaatggaaggact
acggggactctggaaaagggtgtagggattccagaacattccatgatgctggatgaagaa
acatccagaaacatgtcttccaaaatatcgttgactagggagaagagatgcactgcgtca
tggacagaaaatggaaacgggggtccagaaaccccagagaccttgggagagacagtcagc
agcatactctgtgactcctgcagtccaaaagtgctgctgtcattaggtgaaaaactggcc
cagactccagaagacccagcatctttaggacaggcagcttctaaaggaaggtcacgggac
aaggttgcatgccctctttgccacacccaaggagaactgcctgctaaggcctgtgtgcaa
agttcctgtagctgctcggttgctcctggggaccccaaggcctcaggcagacactccata
tgcttccagtgccaaagctcgcgtgcaggaaagagctgtgaagcccagagcccccagttc
ctaccacagtgcccacgtcacatgaagcaggtgcagctgctcttctgtgaggaccacagg
gagcccatctgcctcatctgcaggctgagccaggagcatcaaggacatcgagtgcgcccc
atagaggaggctgcactacagtacaaggagcagatccggaagcagttggagcgcctgcgg
gagatgaggggatatgtggaggagcacaagcttccggcagacaagaaagcagaggacttc
ctgaaacaaacagaaactcagaaacagaggatatcatgtccgcttgagaagctattccaa
ttcctggagcagcaagagcaactctttgtgacctggctgcaggagctagtccagaccatc
ggcaaggtccgagagacatactacacccaggtttccctactggataagctgattggagaa
ctagaggccaagcaagaccagccagagtgggagctcatgcaggacattggagccaccttg
cacagggctgagacgatgactgcctctgagctgttgggcattcctccaggcgttaaagaa
aaactgcacctgctctaccagaaatcaaagtccgccgagaagaatatgcagcgtttctca
gaaatgctgggctccgaaatggcattcagcgcttcagatgtagcaacacgggaagggtgc
aggcctagcacaaccaaggcccaggccttgatccccaccgttcacctaaagtgtgatggt
gcacacacacaggatttcgatgtaatactttgcgcagagctggaagctggaggatcagaa
cctcaagattaccttcatccgtcgtcagctcaagacacacctgagctacacgagatccat
tctcagaacaacaaaagaaaatttaaatctttcctgaagtggaaaccttccttctccaga
accgacaggtgcttaagaacatgctggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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