KEGG   Rattus norvegicus (rat): 58946
Entry
58946             CDS       T01003                                 
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1 isoform 1 precursor
  KO
K06753  roundabout, axon guidance receptor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    58946 (Robo1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    58946 (Robo1)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  ROBO family
   58946 (Robo1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Pur_ac_phosph_N Big_4
Other DBs
NCBI-GeneID: 58946
NCBI-ProteinID: NP_071524
RGD: 61941
Ensembl: ENSRNOG00000029614
UniProt: O55005
Position
11:24067869..25108694
AA seq 1651 aa
MKWKHLPLLVMISLLTLSKKHLLLAQLIPDPEDLERGNDNGTPAPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTVTNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLTLSCVATG
SPVPTILWRKDGVLVSTQDSRIKQLESGVLQIRYAKLGDTGRYTCTASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSKNTVTLLWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPT
TQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGASHGE
SEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPR
SVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIP
SLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLSSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPATQPWLADTWPNTGNSHNDCSINCCTASNGNSDSNLTTYSRPADCIANYN
NQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQ
ANLSNNMNNGGGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQGGMNWADLLPPPPAHPPPHSNSE
EYSMSVDESYDQEMPCPVPPARMYLQQDELEEEEAERGPTPPVRGAASSPAAVSYSHQST
ATLTPSPQEELQPMLQDCPEDLGHMPHPPDRRRQPVSPPPPPRPISPPHTYGYISGPLVS
DMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEE
DNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRP
TSPVSTDSNMSAAVIQKARPTKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPSVQSKAQ
LEARPIMGPKLASIEARADRSSDRKGGSYKGREALDGRQVTDLRTSPGDPREAQEQPNEG
KARGTKTAKRDLPPAKTHLIPEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQA
NVGRRNMAEMQVLGGFERGDENNEELEETES
NT seq 4956 nt   +upstreamnt  +downstreamnt
atgaaatggaaacatcttcctcttctggtcatgatatctctcctcactctatcaaaaaag
catcttcttctggcccagcttattccagaccctgaggacctagagagggggaacgacaac
gggacgccagcccccacctctgataatgatgacaattcgctgggctacacaggctcccgt
ctccgtcaggaagatttcccaccgcgcattgttgagcacccttcagacctgatcgtctct
aaaggggaacccgccaccctcaactgtaaagctgaaggccgccctaccccgactatagaa
tggtacaagggcggcgaaagagtggaaacggacaaagacgaccctcgctcacaccgaatg
ctgctgccaagtggatctttatttttcttacgcatagtgcatggacggaagagtaggcct
gacgaaggggtctacatctgtgtagcaaggaattacctcggagaggctgtgagccacaat
gcatcgctggaggtagctatactacgggatgacttcagacaaaacccttcagatgttatg
gtggcggtgggcgagcctgcagtaatggaatgccagcctcctcggggccacccagagccc
accatctcctggaaaaaggatggctcacccctggatgataaagacgagcgaatcactatc
cgaggcgggaagctcatgatcacgtacacccgtaaaagcgatgctggcaagtatgtttgt
gttggtaccaacatggtaggggagcgggagagcgaagtcgcggagctgactgtcttagag
agaccgtcctttgtaaagagacccagtaatttggcagtgactgtggatgacagtgctgag
tttaagtgtgaggcccgaggagaccccgtgcctacggttcggtggaggaaagatgacgga
gagctgcccaaatccagatatgagatccgagatgatcatactttgaaaattcggaaggtg
acagctggcgacatgggatcatacacttgtgttgcagaaaatatggttgggaaagccgaa
gcatcagccactttgacagttcaagagccaccacattttgtcgtgaagcctcgagaccag
gtggttgccttggggcgaactgtgacttttcagtgtgaagcaactggaaatcctcaacca
gctatcttttggcggagagaggggagtcagaatctgcttttctcataccagcctccacag
tcctctagccggttttcagtttcccagacgggggacctcactgttacgaacgtccagagg
tctgatgtcggttactatatctgtcagactttgaacgtggctggaagcatcatcacaaag
gcatatttggaagttactgatgtgattgcggaccggcctcccccagtcatccgacaaggt
cctgtgaatcagactgtagcagtggatggtactttaactctcagctgtgtggccacaggc
agtcccgtgcccacaattctgtggaggaaggatggagtccttgtttcaacccaagattct
cggatcaaacagctggagagcggggtcctgcagatccgctacgctaagctgggtgacacc
ggtcggtacacctgcactgcttcgacccccagtggtgaggccacgtggagcgcttacatc
gaagtccaggaatttggagttccagttcaacctccaagacccaccgaccccaatttaatc
cccagtgcgccttcaaagcctgaagtcacagatgtgagcaaaaacacagtcactttattg
tggcagcctaacctgaactcaggagcaaccccaacgtcttatattatagaagccttcagc
catgcatctggtagcagctggcagaccgtggcagaaaatgtgaaaacagaaacattcgcc
atcaaagggctcaaacctaatgcgatctaccttttcctggtgagggcagcaaatgcctat
gggattagcgatccaagccaaatatccgatccagtgaaaacacaagatgtcccaccaacc
acccaaggggtggaccacaagcaggtccagagagaactgggcaatgttgtcttgcatctc
cacaaccctaccatcctttcttcctcttctgtcgaagtgcactggacggtggaccaacaa
tctcaatatattcaaggttataaaattctctaccgaccatctggagccagccatggcgaa
tcggagtggttagtttttgaagtgaggaccccaaccaaaaatagtgtggtgatccccgat
ctgagaaaaggcgtcaactacgagattaaggcccgcccattttttaatgagttccaagga
gcagatagtgaaatcaaatttgccaaaaccttagaagaagcaccaagtgcccctccccga
agtgtcactgtatccaagaatgatggaaatgggacagcaattctggtcacttggcaaccg
cctcctgaagacacacagaatggaatggtccaagaatataaggtttggtgtctcgggaat
gagactaggtatcacataaacaagacagtagatggctctaccttttcggtggtcatcccc
tctctggttcctgggatccgctacagtgtagaagtggctgcaagcactggggctggccct
ggggtgaagagtgaaccccagttcatccagttagattcccatggaaaccccgtgtctccc
gaggaccaagtgagcctggctcagcagatctccgacgtggtgaagcagccagccttcatt
gcgggcatcggggccgcctgttggatcattctcatggtcttcagtatctggctttaccga
caccgcaagaagagaaacgggctcagcagcacgtacgcggggatccggaaagtcccgtcc
tttaccttcacaccaacagtaacttatcaaagaggaggcgaagccgtcagcagtggaggg
aggccgggactcctcaacatcagtgaacctgccacacagccatggctggcggacacgtgg
cccaacacaggcaacagtcacaatgactgctccatcaactgctgcacagccagcaacggc
aacagcgacagcaacctgaccacctacagtcgcccagctgattgtatagcaaattataac
aaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtttatggtgat
gtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggac
gggcgttttgtcaatccatcagggcagcccactccctacgccaccacgcagctcatccag
gcaaatctcagcaacaatatgaataacggcggcggggactccagcgagaaacactggaag
cctccggggcagcagaaacaggaagtggcaccaattcagtataacatcatggagcaaaac
aagctgaacaaagattatcgggcaaatgacacaatccctccaaccatcccgtacaaccaa
tcctatgaccagaatacaggaggatcttacaacagctcagatcggggcagtagtacatct
gggagtcaaggccacaagaaaggggcacggacaccaaaggcacccaagcagggtggcatg
aactgggcagacttgctgccccctcccccagcgcatcctcccccacacagcaacagcgag
gaatacagcatgtctgtagatgaaagctatgatcaagaaatgccgtgccctgttccgcct
gcacggatgtatttgcaacaggatgaattagaagaagaggaagctgaaagaggccccacg
ccccctgtccggggggcagcttcgtccccagctgctgtgtcctacagccatcagtccacg
gccactctcaccccgtctccccaggaagagctccagcctatgttacaggattgtccggag
gacctcggccacatgccccacccaccagacaggaggcggcagccggtgagtcctcctcca
ccaccacggccaatttccccaccacatacttacggctacatttcaggacccctggtctca
gacatggatacggatgccccagaagaggaggaagacgaagctgacatggaagttgctaag
atgcagacccgaaggctgttgttacgtgggcttgaacagaccccagcatctagtgttggg
gacctcgagagctcggtcactggctccatgatcaatggctggggctcagcctcagaagag
gacaacatttccagtgggcgctccagtgtcagttcatcggatggttcctttttcactgac
gctgattttgcccaggcagttgccgcagccgccgagtatgcgggcctgaaggtggctcgc
cgccagatgcaggatgctgctggccgccgacacttccatgcctcccagtgccctaggccc
acgagtcctgtgtctacagacagcaacatgagtgctgctgtaatccagaaagccagaccc
accaagaaacagaagcaccagccaggacatctgcgcagagaggcctacacagatgatctt
ccaccccctccagtgccaccacctgctataaaatcgcccagtgtccagtccaaggcacag
ctggaggcacggcctataatggggccaaagctcgcttctatagaagcgagagcagacaga
tcatcagacagaaaaggcggcagttacaaggggagagaagctctggacggaagacaagtc
actgacctgcgaacaagcccaggtgaccccagagaagcacaggagcagccaaacgaaggg
aaagcacgagggacgaagacagcaaagcgagaccttccaccagcgaagacacacctcatc
ccagaggatatccttccgtactgtaggcctactttcccaacgtcaaacaaccctagggat
cccagttcttcaagctcaatgtcatcaagaggctcaggaagccgacagagagagcaagca
aatgtgggccgaagaaatatggcagaaatgcaagtacttgggggatttgaaagaggagat
gagaataatgaagaattagaggaaactgaaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (21)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (19)   
DNA sequence (21)   
   RefSeq(nuc) (19)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (61)   

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