KEGG   Rattus norvegicus (rat): 58958
Entry
58958             CDS       T01003                                 
Symbol
Nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 precursor
  KO
K14314  nuclear pore complex protein Nup210
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    58958 (Nup210)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    58958 (Nup210)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    58958 (Nup210)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     58958 (Nup210)
SSDB
Motif
Pfam: Big_2
Other DBs
NCBI-GeneID: 58958
NCBI-ProteinID: NP_445774
RGD: 69339
Ensembl: ENSRNOG00000005390
UniProt: P11654 A6IB90
Position
4:complement(125068736..125167238)
AA seq 1886 aa
MARASLIQPGLWALLLLQAVGPAVAAKLNIPKVLLPFTRATRVNFTLEASEGCYRWSSTR
PEVASIEPLGSSEQQCSQKAVVQARLTQPARLTSIIFAEDITTGQVLRCDAIVDLIHGIQ
IVSTTRELYLEDSPLELKIQALDSEGNTFSTLAGLVFDWTIVKDTEANGFSDSHNALRIL
TFLESTYIPPSYISEMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVRPAEVRLLIL
ENILLNPAYDVYLLVGTSIHYKVQKIRQGKITELSMPSDQYELQLQNSIPDPQGDPARPV
AVLTQDTSRVTAMQMGQSNLVLGHRSIRMQGASRLPNSTIYVVEAGYLGFTVHPGDRWVL
ETGHLYAVTIEVFDRSSNKVYPSDNIRIEAVFPAEFFEVLSSSQNGSYHHVRAIQSGQTT
ISASLTSVVDQDGGVHVLQVPVWNQQEVDIHIPITLYPSILTFPWQPKTGAYQYTIKAHG
GSGNFTWSSSSYMVATVTVKGVMTTGGDTGLSVIRAHDVQNPLHFGEMKVYVIEPSSMEF
APCQVEARVGHTLELPLTISGLMPGGSSEVVTLSDCSHFDLVVEVENQGVFQPLPGRLPP
GPEHCSGVKVRADAQGSTTLLVSYTHGHVHLGAKITLAAYLPLKAVDPSSVAVVTLGSSK
EMLFEGGPRPWVLEPSKFFRNVTSEDTGSISLSLLGPPASRNYQQHRVLVTCQALGEQVI
ALSVGNRPSLSNPFPAVEPTVVKSVCAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVS
SHRNPLLDLGAYDQQGRRFDNFSSLSIQWESFRPLLASIEVDQPMQLVSQDDGNGQKKLH
GLQTVSVHEASGTTAISATATGYQQSHLSAAGVKQLRDPLVPVSASIELILVEDVRVSPE
EVTIYNHPGVQVELHITEGSGYFFLNTSTQDIINVAYQDTRGVAMVHPLFPGSSTVMVHD
LCLTFPAPAKATIHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLK
LRAASQIITLVTLDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTAQQIEVFPP
FRLIPRKVTLIIGAMIQITSEGGPQPQSNILFSINNESVAAVSSAGLVRGLMVGNGSVLG
VVQAVDAETGKVIIVSQDHVEVEVLQLQAVRIRAPITRMRTGTQMPVYVTGITSNQSPFS
FGNAVPGLTFHWSVTKRDVLDLRGRHHEVSIRLSPQYNFAMNVHGRVKGRTGLRVVVKAL
DPTAGQLHGLGKELSDEIQIQVFEKLRLLNPEVEAEQILMSPNSFIKLQTNRDGAAILSY
RVLDGPEKAPIVHIDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTVLVAVKVSPISYLRIS
MSPVLHTQHKEVLTALPLGMTVTFTVHFHDSSGDIFHAHNSDLNFATNRDDFVQIGKGAT
NNTCIIRTVSVGLTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLIS
LGGVSGTWSSSAGNVLYVDPKTGVAIARDAGPVTVYYEIAGHLKTFKEIVVVTPQKIVAR
RLHATQTSIQEATASKVTVSVGDRSSNLLGECSSAQREAIEALHPESLISCQLQFKQDVF
DFPARDIFSVEPGFDTALGQYLCSVTMHRLTDKQLKHLNMKKTSLAVTASMPSSRTSVEK
VGAEVPFSPGLYANQAEILLSNHYPSSEVKIFGAVEILENLEVRSGSPAVLASVKEKSFG
LPSFITYTVGVLDPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLL
SHFLDSYQVMFFTFFALLAGTAVTIIAYHTVCAPRELASPLALTPHASPQHSPHYLASSP
TAFNTLPSDRKASPPSGLWSPAYASH
NT seq 5661 nt   +upstreamnt  +downstreamnt
atggcgcgggcctcgctgatacagccggggctctgggcgctgctgttgctgcaggcagtg
ggccccgccgtggccgccaagcttaacattcccaaggtgctgctgccctttacgcgagcc
acgcgcgtgaacttcactctggaagcttctgagggctgctaccgctggtcatccacacgg
ccagaggtagccagcatagagccattgggctctagtgaacagcagtgctcccagaaggca
gtggtgcaggcccgcctgacccagccagcccgcctgaccagcatcatctttgcagaagac
atcactacaggccaggtgctgcgctgcgacgccattgttgatctcatccacggcattcag
attgtctctaccacccgtgagctctatcttgaggactctccgctggagctgaagatccag
gctctggactcagaagggaataccttcagtaccctggcaggcctggtctttgactggaca
attgtgaaggatacagaggccaatggattctcagactcccacaatgcactacgaatcctc
accttcttggaatctacatatatcccgccttcctacatctcagagatggagaaggcagcc
aaacaaggcgacaccatcctggtgtctgggatgaagactggaagctccaagctcaaggct
agaattcaggaggctgtctacaagaatgttcgccctgcggaagtcaggctgctgatcttg
gagaacatccttctgaatccagcctatgatgtttacctactggtggggacgtccattcac
tacaaggttcagaagatcaggcagggcaagattacagaactctcaatgccttccgatcag
tacgagctgcagctccagaacagcatcccagatccccagggagaccctgcccgtcctgtg
gccgtcctgacccaggacacatcaagagtcactgccatgcagatgggacagagcaacctg
gtcctgggccacaggagcatccgtatgcaaggagcttctaggctgcccaacagcaccatc
tatgtggttgaagccgggtacctaggcttcacagttcaccctggtgacaggtgggtgctt
gagactggacatctgtatgcagttaccatcgaagtatttgatagatccagcaacaaggtc
tacccgtctgacaacatccgaattgaagctgtgtttcctgctgagttttttgaggttctg
tcatcttcccagaatgggtcttatcatcatgtcagggctatccagagtggccagacgacc
atcagtgcaagcctcacctctgtggtggaccaggatggtggagtccatgtgcttcaggta
cctgtgtggaaccagcaagaagtagacattcatatacccatcacactctatcccagcatc
ctgacgtttccatggcaaccaaagacaggagcctatcaatatactataaaggcccatggg
ggcagtgggaacttcacctggtcttcctcgagctacatggttgccacggttactgtcaag
ggtgtcatgaccacaggcggtgacactggcctcagtgtgatccgggcacatgatgttcag
aaccctctccattttggtgagatgaaggtgtatgtgattgagcccagcagcatggagttt
gccccgtgccaggtggaggctcgagtgggtcacaccctggagctgcccctgacaatcagt
ggcctcatgcccggtgggagcagcgaggtggtcaccctgagcgactgctcccattttgac
ctggtggtggaggtggagaaccagggtgtgttccagccattgccagggaggctgccacca
gggcctgagcactgcagtggagtcaaagtgagagctgatgcccaggggtccactaccctc
cttgtcagctacacacatggccatgtgcacttgggtgcaaagatcactcttgctgcctac
ctgcccctcaaggctgtggatccctcttctgttgctgtggtaaccctgggatcctcaaag
gagatgctgtttgaaggaggccccaggccatgggtcctggaaccttccaaattctttcgg
aatgtcacttctgaagacacaggcagcatcagtctctctctcttgggtcctccagcctct
cggaattaccagcagcaccgggtccttgtgacctgccaggccctgggtgagcaggtcatc
gccctgtctgtggggaaccggcccagcctctctaaccccttccctgctgtggagcccact
gtggtgaaatccgtctgcgccccaccgtccaggcttactctcatgcctgtctatgccctc
ccgcagctcgacctctcttgtccattgctgcagcagaataagcaggtggttccagtatcc
agtcaccgcaatcccctgttagacctgggtgcttatgaccaacaaggccggcgattcgat
aacttcagctctctgagcatccagtgggagtcctttcggccactgctggccagcattgag
gttgaccagcccatgcagctggtatcccaggatgatgggaatggccaaaagaaactacat
ggtttgcagacagtttcggttcacgaggcatcaggaaccacagccatctctgccacggcg
actggctaccagcagtcccacctgagtgcagccggagtgaagcagctgcgtgaccctcta
gtacctgtgtcagcctccattgagcttatactcgtagaggatgtgagggtcagtccagaa
gaagtgaccatctataaccatcctggtgtccaggtagaactccacatcacagaaggctct
ggctatttcttcctcaacacaagcacccaggacatcatcaatgtggcctaccaggacacc
cggggcgtggctatggtgcatcctctgttcccaggctcatcaactgtcatggtccatgac
ttgtgcctgaccttcccagccccagcaaaggccaccattcatgtctccgacatccaggag
ctctatgtccgagtggtggacaaggtggagatcgggaaggctgtcaaggcctatgtccgt
gtgttggacttctacaagaagcctttcctggccaagtacttcacctttatggacctgaag
ctgcgagcagcctcccagatcatcacgctggtgactctggatgaagctctagacaattac
acggccacattccttgtgcacggcgtggccattggccaaaccagcctgtcggcaagtgtg
acggacaaatctgggcagagagtcagctccaccgcacaacagatcgaggtcttcccccca
ttcagactgataccaaggaaggtgacactgattattggagccatgatacagatcacctcc
gagggcggcccccagcctcagtccaacatcctcttctccatcaacaatgagagtgtggct
gcagtgagcagcgccgggctggtgcgtgggctcatggttggcaatggctctgtactggga
gttgtgcaggcagtggatgccgagactggcaaggtcatcatcgtctcccaggatcatgtg
gaagtagaggtgctacagctccaggcagtgaggatccgagccccgatcacacgaatgagg
accgggacccagatgcctgtctatgtcaccgggatcaccagcaaccagagccctttctcc
tttggcaatgctgtgccaggcctgaccttccactggtctgtcaccaagagggatgtcctg
gaccttcgaggacggcaccatgaggtgtcaatccggctctcgcctcagtacaattttgcc
atgaatgtgcatggccgggtgaaaggtcggactggactgcgggtggtggtcaaagctctg
gaccccacagctgggcagctgcatggtctcggcaaggagctctcagatgagatccaaatt
caggtatttgaaaaactgcggctgctgaaccctgaagtagaagcagaacaaatactaatg
tcacctaactcgtttataaagctgcagacaaacagggatggtgcagccattctgagctac
cgggtcctcgatgggcctgagaaggctcccatcgtgcacattgacgagaagggctttctg
gtgtccggctctgggattggagtgtccaccctcgaagtgattgcacaggagcctttcggc
accaaccagactgtccttgtcgctgtaaaggtctctcctatttcatacctgaggatctcc
atgagcccagtcctgcacactcagcacaaggaggtgctgacagctctgcctctggggatg
actgtgaccttcactgtccacttccatgacagctctggagacatcttccacgctcataat
tcagacctcaatttcgctactaacagagatgacttcgtgcagattggcaagggggccacc
aacaacacctgcatcatccgcacagtcagtgtgggcttgacactgctccacgtgtgggat
gtggaacatctcggcctctccgacttcgtgccactacctgtcctgcaggccatcacccca
gagttgtctggagctgtggtggtgggcgacatcctctgcctggctagcgttctcattagc
ctgggaggtgtctcagggacctggagctcctcagctggcaatgtcctctatgttgacccc
aagacaggcgtggctatagcccgagatgcagggcctgtgactgtttactatgaaatcgct
ggacatctgaagaccttcaaggagatagtggtcgtcacccctcagaagattgtggcccgt
cgcctccacgccacgcagaccagtatccaggaagccacagcctctaaagtgactgtcagc
gtgggagacaggagctctaacctacttggtgagtgctcctctgcccagcgagaggccata
gaagccttgcacccagagtccctcatcagctgccaactccagttcaagcaagatgtcttt
gacttccctgctcgtgacatcttctctgtggaaccaggatttgatactgcactgggccag
tacctctgctcggttactatgcacagactgacagataagcaactgaagcacttgaacatg
aagaagacatcactggcggtcaccgcctccatgcctagcagccgtacatctgtagaaaag
gtgggagctgaggtccccttcagtccagggctctatgccaaccaggcagaaatccttttg
agcaaccactaccccagctccgaggtcaagatcttcggtgctgtggaaattctggaaaac
ttggaggtgaggtccgggtccccagcagtgctagcctccgtgaaagagaagtcatttgga
ctgcccagcttcatcacgtacacagttggtgtcttggatcccacagctggcagccaaggc
cctctgtccactgccctgaccttctccagtcctgccactaaccaggccatcaccattcca
gtcactgtggcctttgtgttggatcgtcgtgggcctggtccctatggagccagcctcctg
tcacacttcctggactcctatcaagtcatgttcttcaccttttttgccctgctggctggg
acagcagtcaccattatagcctaccacacggtctgtgcaccccgggaacttgcttcacca
ctggccctcacgccccatgccagccctcagcacagcccccactatcttgcctcatccccg
actgctttcaacacactgccttctgatcgcaaagccagccctccctcagggctctggagc
ccagcctatgcctctcactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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