KEGG   Rattus norvegicus (rat): 58982
Entry
58982             CDS       T01003                                 
Symbol
Ncan
Name
(RefSeq) neurocan core protein precursor
  KO
K06794  neurocan core protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    58982 (Ncan)
   00536 Glycosaminoglycan binding proteins [BR:rno00536]
    58982 (Ncan)
   04091 Lectins [BR:rno04091]
    58982 (Ncan)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Aggrecan / versican family
   58982 (Ncan)
Glycosaminoglycan binding proteins [BR:rno00536]
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   58982 (Ncan)
Lectins [BR:rno04091]
 C-Type lectins
  Group 1: Proteoglycan core proteins
   58982 (Ncan)
SSDB
Motif
Pfam: Xlink Lectin_C Sushi EGF V-set hEGF EGF_2 JAG1-like_EGF2
Other DBs
NCBI-GeneID: 58982
NCBI-ProteinID: NP_113841
RGD: 619941
Ensembl: ENSRNOG00000048036
UniProt: G3V8R2 A6KA90
Position
16:19335907..19362371
AA seq 1263 aa
MGAESVWASGLLVLWLLLLVSGDQDTQDTTTTEKGLHMLKSGSGPIQAALAELVALPCFF
TLQPRQSPLGDIPRIKWTKVQTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYPRHRA
NATLLLGPLRASDSGLYRCQVVKGIEDEQDLVTLEVTGVVFHYRAARDRYALTFAEAQEA
CHLSSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGVRSYG
RRDPQELYDVYCFARELGGEVFYVGPARRLTLAGARALCQRQGAALASVGQLHLAWHEGL
DQCDPGWLADGSVRYPIQTPRRRCGGSAPGVRTVYRFANRTGFPAPGARFDAYCFRAHHH
TPQRGDSEIPSSGDEGEIVSAEGPPAPELKPRLGEQEVITPDFQEPLVSSGEDEPLDLTR
TQASQETLASTPGGPTLASWPSREKWLLTGVTSSTGVPSPSSLGVDMEETTPSGTQVAPT
PTMRRGRFKGLNGRHFQQQGPEDQLLEAAEASAQPPTLEVTADHMGPSAATEALESDQSH
SPWAILTNEVDVPGAGSLGSRSLPESRKWSPSLISPSTVPSTDSTPGLKPGADEAPGVKS
AIHHPPWLPSEPAVPSSIPSEALSAVSLQASPGDGSPDFPIVAMLRAPKLWLLPHSTLVP
NVSPIPLSPASPLPSSVPEEQAVRPVSFGAEDPETPFQTTMAAPGEASHGSPEADSIEIE
GISSMQATKHPISGPWASLDSSNVTVNPVPSDAGILGTESGVLDLPGSPTSDGQATVDKV
LATWLPLPGHGLDTGSQSTPMEAHGVTMSVEPTVALEGGATKDPMEATMDVVPSTVDATS
GSEPKSSISSTHVVVTAAGDQGTPTLTPTSSEGQVVAQESLGTLTSLPSHPWSSLASSMD
EVASVSSGEPTGLWDIPSTLIPVSLGLDESDLKVVAESPGLEGFWEEVASGQEDPTDPCE
NNPCLHGGTCRTNGTMYGCSCDQGYAGENCEIDIDDCLCSPCENGGTCIDEVNGFICLCL
PSYGGNLCEKDTEGCDRGWHKFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSVHSPEEHK
FINSFGHENSWIGLNDRTVERDFQWTDNTGLQYENWREKQPDNFFAGGEDCVVMVAHENG
RWNDVPCNYNLPYVCKKGTVLCGPPPAVENASLVGVRKVKYNVHATVRYQCDEGFSQHHV
ATIRCRNNGKWDRPQIVCTKPRRSHRMRRHHHHPHRHHKPRKEHRKHKRHPAEDWEKDEG
DFC
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgggggccgaatctgtctgggcctcaggcctcctggtgctgtggctgcttctcctagtg
tctggggatcaggacacacaggacaccaccaccacggaaaaggggcttcacatgctgaag
tcggggtcaggacccatccaggctgctttggcagagttagtggccctgccctgcttcttt
acccttcaaccacggcaaagccccctgggagacattcctcggatcaagtggacgaaagtt
cagactgcatcaggccagcgacaggatttgccaatcttggtggccaaagacaacgtggtg
cgtgtggccaagggctggcagggacgggtgtcattgcctgcctatccccggcacagagcc
aatgctacacttctgttggggccactgcgagccagtgactctgggctgtatcgctgccaa
gtggtgaagggtatcgaggatgagcaggacctggtaaccctggaagtgacaggcgtcgtg
ttccattatcgggcggcccgggaccgctatgcgttgaccttcgctgaggcccaggaggct
tgtcacctgagctccgctaccattgcggctccaaggcacctgcaggctgcgttcgaagat
ggctttgacaactgcgatgcgggctggctctcagaccgcacggtccggtacccgatcact
cagtcgcgtcccggttgctatggtgatcgcagcagcctgccaggtgtccggagctacggg
agacgcgacccgcaggaactctacgatgtctactgctttgcccgcgagctagggggtgaa
gtcttttacgtgggccccgcccgccgactgaccctggcgggggcgcgggcactgtgtcag
cgtcagggtgcagcgctggcctccgtgggacagttgcacctggcctggcacgagggcctg
gaccagtgcgacccgggctggctggcagacggcagcgtgcgctacccgatccagactcca
cggcggcgttgcgggggctccgctccaggtgtgcgcacagtgtaccgcttcgccaaccgc
actggctttcctgcgccaggagcccgcttcgacgcctactgcttccgagctcatcaccat
acaccacaacgtggagactccgagatcccctcatctggagatgagggggagattgtgtca
gcagaggggccgccagccccagaactaaagcccagattgggggagcaggaggtgataaca
cctgacttccaggaacctctcgtatccagtggagaagatgaacccctagatttgacaagg
acacaagcatctcaggagacgctcgcctctaccccagggggtcccacactggcttcatgg
ccctctcgggaaaagtggctgcttacaggtgtcacaagctccacgggtgtccccagcccc
agcagcctgggagtagacatggaagagacaacaccctcaggcacacaggtagcccccacc
cccacaatgaggaggggccgctttaaagggttgaatggtcgacacttccagcaacagggc
ccagaagaccagcttctggaggcagcagaggccagtgcccagcctcccaccctggaagtt
actgctgaccacatggggccttctgcagccacagaggccttggagagtgaccagagccac
agtccttgggccattctgaccaatgaagtggatgtgccaggggcaggctctcttggcagc
aggagtctcccagagtcccggaagtggtccccgtcgctgatttcacccagtactgtcccg
agcactgacagtactcctggcctgaagccaggggcagatgaggcccctggtgtgaagtca
gccatccaccacccaccctggttgccctcagaacccgctgtcccatcctccattccctca
gaggccctaagtgctgtctccctacaggcatcccctggtgatggctctccagacttcccc
attgtagccatgcttcgagcccccaaactgtggcttctgccacactctacactcgtcccg
aatgtgtccccaatcccactctccccagcttctccactcccctcctcggtcccagaagaa
caggctgtcagacctgtcagctttggagcagaagaccccgagaccccatttcagaccacc
atggctgccccaggtgaagccagccacggatcccctgaggcagactccatagaaatcgag
gggatcagctccatgcaggctacaaagcaccccatctctggcccatgggcttctttggac
tccagtaatgtgacagtgaatcctgtcccttctgatgctggcatcctagggactgagtct
ggggtcttggacttaccagggagtcccacatcagacggacaggccactgtggacaaggtg
ctggccacctggctaccactgcctggccacggactggacactggctcccagtccacaccc
atggaagcccatggagtaaccatgagtgtggaacctacagtggctttggaaggaggtgcc
accaaagacccaatggaggccaccatggatgtggtccccagcactgttgatgccacttcg
gggtctgaacccaaaagttccatttctagcacccatgtggttgtgactgcagctggggac
cagggcacacccacactgacccctacaagctctgaaggtcaggtggtggcccaggagtca
ctgggaaccctcaccagtctgccttctcatccctggtcatctctggcctccagcatggac
gaagtggcctcggtttcctcaggagaacccacagggttgtgggacatccccagcactctg
atacctgtgtccttgggcttggatgaatcagacctgaaggttgtggctgagagcccaggc
ttggagggcttctgggaagaggtggccagtgggcaggaagaccccacggatccctgcgag
aacaacccttgtctgcacgggggcacctgccgcacaaatggcaccatgtacggctgtagt
tgtgatcagggctatgctggggagaattgtgaaattgacattgatgactgcttgtgcagc
ccttgtgagaatgggggtacctgcattgatgaggtgaatggtttcatctgcctctgtctc
cccagctatgggggcaacctgtgcgagaaggacacagaaggatgcgaccgtggctggcac
aaattccagggccactgctaccgctactttgctcatcggcgggcctgggaggacgcagag
agagactgcaggcgccgagccggccacctgacaagtgtccactccccagaagagcacaag
tttattaacagttttggacacgagaattcatggattggcctgaatgacaggacagtagag
agggacttccagtggacagacaacacaggactgcaatatgagaactggagagagaagcag
ccggataatttcttcgcaggtggggaggattgtgtggtgatggtggcgcatgagaatgga
cgctggaatgatgtcccctgtaactacaacctcccctacgtctgcaagaagggtacagtg
ctgtgtgggccccctccagcagtggagaatgcctctcttgttggtgtgcgcaaggtcaag
tacaatgtccatgccactgtgcgataccagtgtgatgaaggattctcccagcaccatgtg
gctaccatccgatgccgaaacaatgggaagtgggaccggcctcagattgtgtgcaccaag
cccaggcggtcacatcggatgcgtcgacaccaccaccatccacaccggcatcacaagcca
cgcaaggagcacagaaaacacaagagacacccagcggaagactgggagaaagatgaaggg
gatttctgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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