KEGG   Rattus norvegicus (rat): 58983
Entry
58983             CDS       T01003                                 
Symbol
Rabggta
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rno01006]
    58983 (Rabggta)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    58983 (Rabggta)
Enzymes [BR:rno01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     58983 (Rabggta)
Prenyltransferases [BR:rno01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   58983 (Rabggta)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    58983 (Rabggta)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    58983 (Rabggta)
SSDB
Motif
Pfam: RabGGT_insert PPTA LRR_4 LRR_9 LRR_8 LRR_1
Other DBs
NCBI-GeneID: 58983
NCBI-ProteinID: NP_113842
RGD: 621697
Ensembl: ENSRNOG00000030483
UniProt: Q08602 A6KH43
Structure
Position
15:complement(33176268..33183320)
AA seq 567 aa
MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP
DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRL
PEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSS
WHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE
PHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLSVEWRTPDGRNRPSHVW
LCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEK
STVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA
YLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP
ALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNL
QGNSLCQEEGIQERLAEMLPSVSSILT
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgcatgggcgcctgaaggtgaagacgtcggaagagcaggcagaggccaaaaggctagaa
cgagagcagaagctaaagctctaccagtcagccactcaagctgtcttccagaagcgtcag
gctggtgagctggatgaatcagtgctagaactgacaagccagattctgggagccaaccct
gattttgccaccctctggaactgtcgaagagaagtactccagcacctggaaaccgagaag
tcccctgaggagtcagctgctcttgtgaaggcagaactgggcttcctagagagctgtctt
cgtgtgaaccctaagtcctatggcacttggcaccaccgctgctggctgctgagtcgcctg
cctgagcccaactgggcccgggagctggagctatgcgctcgcttcctcgaggccgatgag
cggaactttcattgctgggactatcggcgatttgtagccgcacaggctgctgttgcccct
gcagaggaactagccttcactgacagcctcatcacccgtaacttctccaactattcctcc
tggcattatcgctcctgcctcttgccacagctgcacccccagccagactctggcccacag
ggtcggctccctgaaaatgtactgctgaaagagctggagttggtgcagaatgccttcttt
actgaccccaacgatcagagtgcctggttctatcaccgctggctcctgggtcgggcggag
ccccacgatgttctatgctgtgtgcatgtgagccgggaggaggcctgtctgtcggtctgc
ttttctcgtcccctgacagtgggctccagaatggggaccttgctactcatggttgatgag
gcacctttgagtgtggagtggaggactccagatggcaggaaccggcccagccatgtctgg
ctctgtgacctgcctgctgcctctctcaatgaccagttgccccagcacacgtttcgtgtc
atctggacaggaagtgatagccagaaggagtgtgtgcttttaaaagaccgcccagaatgc
tggtgccgagactcagccactgatgaacagctattcaggtgtgagctgtcagtggaaaag
tccacagtgctgcagtctgagcttgaatcctgtaaggagctgcaggaactagagcctgag
aataaatggtgcctgctgaccatcatcctgctgatgcgagcactggaccccctcctctat
gagaaggaaacactgcagtacttcagtaccctcaaagctgtggacccaatgagagcagct
tacttggatgacctgcgcagcaagttcttgctggagaacagtgttctcaagatggagtac
gctgatgtacgcgtgctgcacctggctcacaaggatctcacagtgctctgccacctggaa
caactgctcttggtcactcatcttgacctgtcccataatcgactccgagccttaccccca
gccctggctgctctgcgctgtcttgaggtgctgcaggccagtgacaatgccctggagaac
gtggatggtgtggctaaccttccccggctacaagagctgttactatgtaataaccgcctc
caacagtctgcagcaatccagcctcttgtctcctgccccaggctagtcctcctcaacctg
cagggcaactcgctgtgccaagaagagggcatccaggagcgtttggctgagatgctaccg
tctgtcagcagcatcctcacctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
3D Structure (21)   
   PDB (21)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

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