KEGG   Rattus norvegicus (rat): 59328
Entry
59328             CDS       T01003                                 
Symbol
Smad5
Name
(RefSeq) mothers against decapentaplegic homolog 5
  KO
K16790  mothers against decapentaplegic homolog 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04350  TGF-beta signaling pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    59328 (Smad5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    59328 (Smad5)
SSDB
Motif
Pfam: MH2 MH1 IRF-3
Other DBs
NCBI-GeneID: 59328
NCBI-ProteinID: NP_067724
RGD: 620158
Ensembl: ENSRNOG00000022870
UniProt: Q9R1V3 B1WBR0
Position
17:complement(7867640..7896983)
AA seq 465 aa
MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP
NSTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQP
MDTSNNMIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPANNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgacgtcaatggccagcctgttttctttcactagtccagccgtgaagcgattgttgggc
tggaaacaaggtgatgaggaagagaaatgggcagaaaaggccgtggatgctttagtgaaa
aagctgaagaagaagaagggcgccatggaggagttggagaaagccttgagcagcccagga
cagccaagcaagtgtgtcactatccccaggtccttggacggccgtttgcaagtctctcac
aggaaaggcttgccccacgttatatattgccgtgtttggcgctggccagatttgcagagc
catcatgagctaaagcctttggatatttgtgagtttccttttggatcgaagcaaaaagaa
gtttgtatcaatccataccactataagagagtggagagtccagtcttacctccagtgtta
gtgcctcgtcacaacgaattcaatccccagcacagccttctggttcagttcaggaacctg
agccacaatgagccgcacatgccccagaatgccacgtttcctgattccttccaccagccc
aacagcactcctttccccttatctcctaacagcccctatcctccttcccctgctagcagc
acatatcccaactcccctgcaagctccggaccaggaagtccatttcaactcccagctgat
acccctccccctgcctatatgccacctgacgatcagatgggtcaggataactcccagcct
atggacacaagcaacaacatgattcctcagatcatgcccagcatatctagcagagatgtt
cagcctgttgcctatgaagagcccaaacactggtgttcgattgtgtactatgaactgaac
aaccgtgtcggggaagctttccatgcgtcttccaccagtgtgttagtagacgggtttaca
gaccctgccaataacaagagccgcttctgcttggggctgctgtccaacgttaatcgcaac
tcaaccatcgagaacaccaggcggcacatcgggaaaggtgtccatctatactacgttggt
ggggaggtgtatgccgagtgtcttagtgacagcagcatctttgttcagagtaggaactgc
aactttcaccatggcttccaccccaccaccgtctgtaagattcccagcagctgcagcctc
aaaatttttaacaatcaggagtttgctcagcttctggctcagtcagtcaaccatgggttt
gaggctgtgtatgagctcaccaagatgtgtaccattcgaatgagttttgtcaagggctgg
ggagcagagtaccaccgacaggatgtaaccagtactccatgctggattgagattcacctc
catgggcctctgcagtggctggataaagtcctgacccagatgggctctccgctgaacccc
atttcttctgtttcatag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (14)   
   RefSeq(nuc) (8)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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