KEGG   Rattus norvegicus (rat): 60324
Entry
60324             CDS       T01003                                 
Symbol
Synpo
Name
(RefSeq) synaptopodin
  KO
K21112  synaptopodin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04530  Tight junction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    60324 (Synpo)
SSDB
Motif
Pfam: Calsarcin
Other DBs
NCBI-GeneID: 60324
NCBI-ProteinID: NP_067727
RGD: 620668
Ensembl: ENSRNOG00000019181
UniProt: Q9Z327 A6IXC1
Position
18:complement(56326369..56347359)
AA seq 692 aa
MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNRETQQSSPNPPET
EEVPSPAADINQNPSSPNATLTTAASNSHHNQPTADVNQNPPATITPVQQNSSETQCSPN
GTLDSKPNTPSADDGQRPVPAEEVRSSILLIDKVSAPPSAASPFSREATPLSSSGPPAAD
LMSSSLLIGMQPSTLVASAEQEVSGHAAVTTPTKVYSEVHLTLAKPASVVNRTARPFGMQ
SPGTTSQIEQSPMMGRRHFGEKAWAPPASSMADRSPQPQRHIMARSPMVERRLVGQRSPV
VERRPLGNFTPPPTYAETLSTAPVASQVRSPPSYSTLYPSSDPKPPHLKGQVVPANKTGI
LEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGMEDEPFALGAE
ASNFQQEPIARDRSGPAAAEETVPEWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYAR
RQSRMEKYVIESSGHAELARCPSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHG
YLPENGVLRPEPTKQQPHQMRPSLYALSPVKEPAKISSRATSSRASSRTVSPRAASPAKP
SSLDLVPNLPRAGLPPSPALPRPSRSSPGLYNAPVQDSLQPTAVSPTYSSDISPVSPSRA
WSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggaggggtactcagaggaagccagtctgctgcggcacctggagaaggttgccagtgag
gaggaagaagtaccattggtagtttacttaaaggagaatgcagccctgctgacagctaat
ggactgcacctgtcccagaaccgagagacccagcagtcctcaccaaaccctcctgaaacg
gaggaagtgcccagcccagctgcagatatcaaccagaacccctcctctcccaatgccacg
ctcaccacagcagcctctaacagccaccacaaccaacccaccgctgatgtcaatcaaaac
cccccagccactatcacccctgtccaacaaaattcatctgagacacagtgttccccgaat
ggcacgcttgattccaaacccaacactccaagcgctgatgatgggcagcgcccggtgcca
gcagaggaagtgaggtccagcattctcctgattgacaaggtgtccgctccaccatctgcc
gccagccccttctctagagaagctactcccctctccagctctgggccaccagctgcagat
ctcatgtccagctctctgctcattggcatgcagcctagcaccctagtggcatcagcagaa
caagaggtgtctggacatgcagctgtcaccacgcccactaaggtgtatagtgaagtacat
ctcacactagccaagcctgcatccgtggtcaacaggaccgccaggccatttgggatgcag
tcgccagggactaccagccagatagagcaaagtcccatgatgggaagacgacattttgga
gagaaggcctgggctcccccagctagcagtatggcggataggagtccccagccacagagg
cacataatggcccgcagtcccatggtagaaaggaggctggttgggcagcgaagcccggtt
gtagagagacgccccttaggaaactttaccccaccccccacctatgcggagactttgtca
acagcccccgtggcttcccaggttaggtctcctccctcttattctactctgtatcccagc
tctgaccccaagcctccccatttgaagggccaggtagttcctgccaacaagacaggaatt
ttggaagaatctatggcacgccgaggcagccggaaatcaatgttcacgttcgtggagaag
cctaaggtgacgccgaatccagacttgctggacctcgtgcagacagctgatgagaagcgg
aggcagagagaccaaggggaggtgggcatggaagacgagccctttgccctgggagctgag
gcctccaacttccagcaggagccaatagctcgggacaggtccggccctgcggcagctgag
gagactgtccctgaatgggcttcctgcctcaagtcaccccgtatccaggctaagccgaag
cccaaacccaaccagaatctctcagaggcctcagggaagggggctgagctctatgcccgc
cgccagtcacggatggagaaatacgtcatagagtcgtcaggccatgcggaattggctcgc
tgcccttcacctactatgtcattgccttcatcctggaagtacaccactaatgcccctggg
ggcttccgagtggcgtccttaagcccagcgcggactccgcctgcctctctctaccacggc
tatctgccagagaatggagtcctgcgcccagagcctaccaagcagcagccacaccagatg
aggccttcactctatgctctgtcgccggtcaaggaacctgccaagatctcatcacgtgcc
acctcgtcacgcgcttcgtcacgcactgtctcacctcgtgctgcctccccggccaagcct
agctccctggacctggtgcccaacctgcccagagcaggcctcccaccgtctcctgcgctt
cctcggccttcccgctcctccccaggcctctacaatgccccagtccaggacagcctccag
cccactgccgtgagccccacctacagcagtgatatctcccccgtgtctccctccagggcg
tggtctcctcgagccaagcaggcccccaggccttccttctccacccggaatgctgggatc
gaggcccaggtgtggaaaccttccttctgcttcaagtaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system