KEGG   Rattus norvegicus (rat): 60347
Entry
60347             CDS       T01003                                 
Symbol
Cep78
Name
(RefSeq) centrosomal protein of 78 kDa
  KO
K16765  centrosomal protein CEP78
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    60347 (Cep78)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    60347 (Cep78)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    60347 (Cep78)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   60347 (Cep78)
SSDB
Motif
Pfam: LRR_6 Cortex-I_coil DUF6052 ATPase DUF5798
Other DBs
NCBI-GeneID: 60347
NCBI-ProteinID: NP_068509
RGD: 620464
Ensembl: ENSRNOG00000014041
UniProt: F1LP29 O55160
Position
1:complement(222674193..222702124)
AA seq 789 aa
MIDSVKLRRDCATDFFSHYEYLCALQDSAPLPAVRACLRDGVLDFNADRLRAVDWAPLLS
SLRVNRDLPLVAIKSSFQPWLGESVLRSGGADAHRVCRNRVPSVRSKDISFQLCKALKGC
LSVSGVLRNLELNGLILRERDLTSLTKGLSKSASLVHLSLANCPVGDGGLEIICQGIKNS
VTLKTVNFTGCNLTWQGASHMAKILKYQTMRRHEETWAESLRYRRPDLDCMAGLRRITLN
CNTLIGDQGASAFADSLSEDLWLRALDLQQCGLTSEGAKALLEALETNRTLVVLDIRKNP
LIDHSMMKAVIRKVLQNGRSATSEYQWVTSPSLKELPKTTKQKKKTIVLGSSRKGKATIR
VGLATKKPVSNGRKHGLSKDSYAPDPLPPGASGFLPWRTAERARRNRSFPLIKTHDLSNH
LQQSDFPVTVTVESPSSSETDESEDSSESVHEVPQKTSIRQETLQEKLEECLKQLKEERV
TRLKTDKRISELEHENAQLRNINFSLSEALQAQSLTSMILDDEGVLGSIENSFQKFHAFL
DLLKDAGLGQLATMAGIDQSDFHLLGRPQMSSTVNTPVEEQKGLEDENLDLKQTAVGQMQ
DIGFQKITSDPMVPLPLDTNQVPASTQEAAGSSRDHLGVVALEQQEGSAVGFIAITGSPS
ADGISGGRSLEEVVLSKHSRSSSGKGSTASEPSRRQSAERHSRKDLHSDSDSPVNSKGKG
PGEKRSLLNEPIKSESLKKCVSIKKENRIVTVSSKSIKSKPNLLEHSESDTIGSDFEFQE
HDHSSAHLT
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgatcgactctgtgaagctccgtcgcgactgcgcgaccgacttcttctcgcactatgag
tacctgtgcgcgctgcaggactcggcgccgctgcccgccgtgcgcgcctgcctgcgggat
ggcgtgctggacttcaatgccgaccggctgcgcgcggtggactgggcaccgctgctcagc
tcgctcagggtgaaccgtgacctgccgctggtggccatcaagagctccttccagccgtgg
ctcggggagtcagttctacggtccggaggtgctgatgcacacagagtttgtagaaatcga
gttccttcagtaagatccaaagacataagcttccagttatgtaaggctcttaaaggctgc
ttaagtgtatcaggcgtgctcagaaatctggagctaaatgggctgattctgagagagaga
gatttgactagtctaacaaagggattgagtaaatcagcctctttggtgcacctgtctctt
gcaaactgtccagttggagatggaggtttagaaattatttgtcaaggtataaagaactcc
gtcactctcaagaccgtcaacttcacaggatgcaatctgacgtggcaaggagccagtcat
atggccaagatcttaaagtatcaaaccatgagaagacatgaagagacctgggctgagagt
cttcgctacaggaggccggatcttgactgcatggccggcttaaggcgcatcacactgaat
tgcaacacactcattggtgaccagggtgcaagtgcttttgcagactctctcagtgaggat
ttatggcttcgggcacttgacctgcagcagtgcggccttaccagtgaaggggcgaaggct
ttactggaggccttggaaaccaacagaaccctggtcgttctggatataaggaaaaaccca
cttattgatcattctatgatgaaagcagttatcagaaaggttctccagaacggaaggagt
gcaacttcagagtaccagtgggtaacgtccccgtcactgaaggaactgcccaaaaccact
aagcagaaaaagaaaacgatcgtcctaggaagcagtcgaaaaggaaaagctactattcga
gttggtttagctacaaagaaacctgtgagtaatgggagaaaacatgggctcagtaaagac
tcctatgctcccgaccctctgcctccaggcgcgtctggtttcttgccctggcgcacggca
gaacgtgcaagaagaaacaggagttttccattaatcaaaactcatgatctgtctaatcac
ctgcagcaatcagatttccctgtgactgtgacagtagaaagtccttcatcctcagaaact
gacgagtctgaggattcttcagaaagtgtccatgaagtgcctcagaaaaccagcataaga
caagaaacattacaggagaagctggaggagtgcctaaagcagctaaaggaggagagagtg
acccgcctcaaaactgacaagcgcatcagtgagctggaacatgaaaatgcccagctaaga
aatataaatttctccctgtctgaagcccttcaagcacagtcattgacgagcatgatcctg
gacgatgaaggagtcttgggcagcatcgagaattcttttcagaagttccacgcctttttg
gatctccttaaagatgctgggctcgggcagcttgccactatggctggtatagatcagtca
gatttccacctgttaggtcgtccccagatgagttctacggttaacacacctgtggaagaa
cagaaaggacttgaagatgaaaatctggatctgaagcagactgctgtaggacaaatgcag
gacatcggttttcagaagattacaagtgatcctatggttcctttacctctcgacaccaac
caggttccagcttccacacaagaggcagcaggatcttctcgagaccacctgggggttgta
gccctggagcagcaggagggctctgcagtgggattcattgctataacaggctctccttca
gcagatggcatttcaggaggcagaagtctagaagaggtggtgttgtcaaagcacagcagg
tcttcttcaggcaaagggagcacagcaagcgagccctccagaaggcagtctgctgagaga
cactccaggaaggacctgcattccgactccgactcccctgtgaactcaaaaggcaaagga
cctggggaaaagaggtctttgcttaatgagccaattaaaagtgaatctttgaaaaaatgt
gtttctatcaagaaagaaaatagaatagtgactgtatcatcaaagagtatcaaaagtaaa
cccaatctgctagaacattctgaaagtgatactattgggtctgattttgaatttcaagag
catgaccattcgtcagcacacctgacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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