KEGG   Rattus norvegicus (rat): 60351
Entry
60351             CDS       T01003                                 
Symbol
Nr1h4
Name
(RefSeq) bile acid receptor
  KO
K08537  farnesoid X receptor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04976  Bile secretion
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    60351 (Nr1h4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    60351 (Nr1h4)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:rno03310]
    60351 (Nr1h4)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    60351 (Nr1h4)
Nuclear receptors [BR:rno03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   60351 (Nr1h4)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 60351
NCBI-ProteinID: NP_068513
RGD: 628831
Ensembl: ENSRNOG00000007197
UniProt: Q62735 A6IFR2
Structure
Position
7:complement(25733471..25829440)
AA seq 469 aa
MNLIGPSHLQATDEFALSENLFGVLTEHAAGPLGQNLDLESYSPYNNVQFPQVQPQISSS
SYYSNLGFYPQQPEDWYSPGLYELRRMPTESVYQGETEVSEMPVTKKPRMAASSAGRIKG
DELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCVMDMYMRRKCQDCR
LRKCREMGMLAECLLTEIQCKSKRLRKNVKQHADQTVNEDSEGRDLRQVTSTTKLCREKT
ELTVDQQTLLDYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQILVEFTK
RLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPAGHADLLEERIRKSGISDEYIT
PMFSFYKSVGELKMTQEEYALLTAIVILSPDRQYIKDREAVEKLQEPLLDVLQKLCKIYQ
PENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaatctgattgggccctcccatttacaagccacggacgagtttgctctttctgaaaac
ttatttggagtgctaacagagcacgcggcaggtcctctggggcagaatctggacttggaa
tcgtactccccatacaacaatgtgcagtttcctcaagttcagccacagatctcctcctcg
tcctattattccaacctgggtttctacccgcaacaaccggaagactggtactctcctgga
ctctatgaactcaggcgaatgcccactgagagtgtgtaccagggagagactgaggtatcc
gagatgcctgtgacaaagaagccgcgaatggccgcctcatcggcgggaagaataaaaggg
gatgagctgtgtgtggtctgcggagacagggcctctgggtaccattacaacgcgctcacc
tgcgagggctgcaaaggtttcttccgaagaagcatcaccaaaaacgccgtgtacaagtgt
aagaacgggggcaactgcgtgatggatatgtacatgcgtcggaagtgccaggattgccgg
ctaaggaagtgcagagagatgggaatgttggctgaatgtttgttaactgaaattcagtgt
aaatctaaacggctaaggaaaaatgtgaagcagcatgcggatcagacagtgaatgaggac
agcgaagggcgtgacttgcggcaagtgacctccacgaccaagctatgcagggagaaaact
gaactcactgtagaccagcagaccctcctggattatattatggactcatacagcaaacag
agaatgccacaggagatcacaaataaaatcttaaaagaagaatttagtgcagaagaaaat
tttctcatattaacagaaatggctaccagtcacgtacagattctcgtagaattcacaaaa
agacttccagggtttcagacactggaccacgaagaccagattgctttgctcaaagggtcc
gcagtcgaggccatgttccttcgttcagcggagattttcaataagaaacttcctgccgga
cacgcagacctgttggaagaaagaattcgaaagagcggcatctccgatgagtacataacc
ccgatgtttagtttctataaaagtgtcggggagctgaaaatgacccaggaagagtacgct
ctgctcacagcaattgtcatcctctctccagacagacaatacataaaggatagagaggca
gtggagaagcttcaggagcctctgctcgatgtcctacaaaaactctgcaagatctaccag
cccgagaaccctcagcatttcgcctgcctcctgggtcgcctgacagaactccggacattc
aaccatcaccacgctgagatgctgatgtcttggagggtgaatgaccacaagttcaccccg
ctcctctgtgagatctgggatgtgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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