KEGG   Rattus norvegicus (rat): 60357
Entry
60357             CDS       T01003                                 
Symbol
Prom1
Name
(RefSeq) prominin-1 isoform 2 precursor
  KO
K06532  prominin 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    60357 (Prom1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    60357 (Prom1)
   04090 CD molecules [BR:rno04090]
    60357 (Prom1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   60357 (Prom1)
CD molecules [BR:rno04090]
 Proteins
  60357 (Prom1)
SSDB
Motif
Pfam: Prominin Tweety ApoLp-III DUF2207_C SUR7 DUF3573 Laminin_II DUF898 DUF6377 RasGAP_C Baculo_PEP_C Fez1 DUF4190 DUF1664 GIT1_C ZapD TMP_3 ADIP IL11 MIG-14_Wnt-bd
Other DBs
NCBI-GeneID: 60357
NCBI-ProteinID: NP_001103607
RGD: 69367
Ensembl: ENSRNOG00000003098
UniProt: Q7TSL4
Position
14:71202303..71307008
AA seq 826 aa
MALVFSVLLLLGLCGKMASGGQPAFDNTPGALNYELPTTEYETQDTFNAGIIDPLYQMVH
IFLNVVQPNDFPQDLVKKLIQKRFDISVDTKEVAIYEIGVLICVILGLLFIFLMPLVGFF
FCMCRCCNKCGGEMHQRQKQNESCRRKCLAISLLLICLLMSLGIAFGFVANQQTRTRIQR
TQKLAESNYRDLRALLTEAPKQIDYILGQYNTTKNKAFSDLDSIDSVLGGRIKGQLKPKV
TPVLEEIKAMATAIRQTKDALQNMSSSLKSLRDASTQLSTNLTSVRNSIENSLNSNDCAS
DPASKICDSLRPQLSNLGSNHNGSQLPSVDRELNTVNDVDRTDLESLVKRGYMSIDEIPN
MIQNQTGDVIKDVKKTLDSVSSKVKNMSQSIPVEEVLLQFSHYLNDSNRYIHESLPRVEE
YDSYWWLGGLIVCFLLTLIVTFFYLGLLCGVFGYDKRATPTRRGCVSNTGGIFLMAGVGF
SFLFCWILMILVVLTFVVGANVEKLLCEPYENKKLLQVLDTPYLLNDQWQFYLSGILLKN
PDINMTFEQVYRDCKRGRGVYATFQLENVFNITENFNIERLSEDIVKELEKLNVNIDSIE
LLDKTGRKSLEDFAQSGIDRINYSMYLQEAEKPPTKVDLLTFASFLETEANQLPDGNLKQ
AFLMDAQNIRAIHQQHVPPVQQSLNSLKQSVWALKQTSSKLPEEVKKVLASLDSAQHFLT
SNLSSIVIGETKKFGRTIIGYFEHYLQWVLYAITEKMTSCKPMITAMDSAVNGILCSYVA
DPLNLFWFGIGKATMLLLPAVIIAIKLAKYYRRMDSEDVYDDPSRY
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggctctcgtattcagtgtcctgctgctactggggctgtgtggaaagatggcttcagga
ggtcagcctgcattcgataacactcccggggctttgaattatgaattgcctaccacagaa
tatgagacccaagacaccttcaatgctgggattattgaccctctctaccaaatggtgcac
atcttcctcaacgtggtccagccgaatgacttccctcaagatttggtcaaaaaactcata
cagaagaggtttgacatctcggttgataccaaggaggtcgccatctatgaaattggagtt
cttatctgcgtcatcctgggcctgctgttcattttcctcatgcccctggtgggcttcttc
ttttgtatgtgccgttgctgtaacaaatgcggcggagaaatgcaccagcggcagaagcag
aacgagtcgtgccggaggaagtgcttagccatctccctcttgctgatttgtctgctcatg
agtcttggcatcgcgtttggctttgtggccaaccagcagacaaggactcggatccaaagg
acccagaagctggcagagagcaattacagagacttgcgggctctcctgactgaagcccca
aagcaaatcgactatattctggggcaatacaacacaaccaagaacaaggcattctcagac
ctggacagtatcgattccgtgctgggaggcagaataaagggccaactaaaacccaaagtt
actcctgttctcgaagagattaaggccatggcaacagccattagacagaccaaggatgcc
ctgcagaacatgagcagcagtctgaaaagtctacgtgacgcaagcacccagctcagtacc
aacctgacgtctgtgagaaacagcatcgagaattcactcaacagcaacgactgtgcttca
gacccagccagcaagatctgtgatagcctcagaccacagctgagcaatctggggagcaac
cacaacggaagtcagctcccatcagtggacagggaactcaacaccgttaatgatgtcgac
agaaccgatctggagagcctcgtcaaaagggggtatatgtcgattgatgaaatacccaat
atgatacaaaaccaaactggggatgtcatcaaagatgtcaaaaagaccttggattctgtt
agctccaaggttaagaacatgagccaaagtattcctgtcgaggaggtgctgcttcagttc
tcccactaccttaatgacagcaacaggtacatccacgagtcgctgcccagagtggaagaa
tatgactcatactggtggctgggtggcttaatagtctgcttcctgctgaccctcattgtg
actttcttttacctgggcttgctgtgtggtgtgtttggctatgacaagcgtgccacccca
accagaagaggctgcgtgtccaacactggaggcatcttcctcatggctggggttggattc
agcttccttttttgctggatattgatgatccttgtggttcttacttttgttgttggtgca
aatgtggaaaagttgctctgtgaaccttatgaaaacaagaaattactacaggttttggat
actccctacctgctcaacgatcaatggcaattctatctctctggcatactactcaaaaac
ccagacattaacatgacctttgagcaagtctacagggattgcaaaagaggtcgaggagtg
tatgccacttttcagcttgagaatgtcttcaacatcactgagaatttcaacattgagagg
ctttctgaagacatagtgaaggagttggaaaagctgaatgtgaacattgacagcatcgaa
ctgttggacaaaacaggaaggaagagcctcgaggactttgcacaatctgggatagataga
atcaattattccatgtacttacaggaggctgagaaaccccctaccaaagtggacctgctg
acatttgcctcttttctggaaacagaagcaaaccagttgcctgacggaaatctgaaacag
gccttcttaatggatgcacagaacattcgagccatccaccagcagcacgtccctcctgtg
cagcagtcactgaattcattaaaacaaagtgtctgggcccttaagcaaacaagcagcaag
ttgccggaggaagtgaagaaggtccttgcctctttggattctgctcagcatttcctcacc
agtaacctctcctccatcgttattggagaaacaaagaagtttgggagaacaataataggc
tactttgaacattatctgcaatgggtcttgtacgccatcacagagaagatgacatcctgc
aaacccatgattacagcaatggactctgctgttaatggcattctgtgtagctatgttgct
gaccctctgaatctgttctggttcggcatagggaaagccaccatgctcttacttccggct
gtaatcatcgctatcaagttggccaagtactatcgcaggatggattcagaggatgtatat
gatgacccgtctcgatactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (28)   
   UniProt (1)   
   RefSeq(pep) (27)   
DNA sequence (43)   
   RefSeq(nuc) (27)   
   GenBank (8)   
   EMBL (8)   
Protein domain (20)   
   Pfam (20)   
All databases (102)   

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