KEGG   Rattus norvegicus (rat): 60383
Entry
60383             CDS       T01003                                 
Symbol
Rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
  KO
K10630  RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:2.3.2.31]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04217  Necroptosis
rno04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    60383 (Rbck1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    60383 (Rbck1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    60383 (Rbck1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     60383 (Rbck1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    60383 (Rbck1)
  Multi subunit Ring-finger type E3
   LUBAC complex
    60383 (Rbck1)
SSDB
Motif
Pfam: zf-RING_UBOX zf-RING_2 zf-C3HC4_2 zf-RING_5 IBR zf-C3HC4 zf-RanBP ubiquitin zf-RING_11 zf-C3HC4_4 GAGA
Other DBs
NCBI-GeneID: 60383
NCBI-ProteinID: NP_068532
RGD: 708404
Ensembl: ENSRNOG00000006695
UniProt: Q62921
Position
3:complement(161249389..161266321)
AA seq 508 aa
MDEKTKKAEEMALSLARAVTGGDEQAAIKYATWLAEQKVPLRVQVKPEVSPTQDIRLCVS
VEDAYMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPSLQQWVVGQRLARDQETLHSHGIR
RNGDSAYLYLLSARNTSLNPQELQRQRQLRMLEDLGFKDLTLQPRGPLEPVLPKPRTHQE
TGQPDAAPESPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQIPASYQPDEEERARLAG
EEEALRQYEQRKQQQQEGNYLQHVQLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLH
TFCRECLQGTIRNSQEAEVSCPFIDNTYSCPGKLLEREIRALLSPEDYQRFLDLGVSIAE
NRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCKAIHERMNCREYQDDLAHRA
RNDVAAQQTTEMLRVMLQQGEAMYCPQCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWG
PGGPGDTSGGCRCRVNGIPCHPSCQNCH
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggacgagaagaccaagaaagcagaggagatggccctgagccttgcccgggcagtgact
ggcggagatgaacaggctgcaatcaagtatgccacctggctggcagagcagaaggtaccc
ctcagggtgcaagtaaaacccgaggtttccccaacacaagacatcaggctttgtgtgagt
gtggaagatgcttacatgcacactgtcaccatttggctcacagtacgccctgatatgaca
gtggcctcccttaaggacatggtattcctggactatggctttccacccagcctgcagcag
tgggtggttggacagaggctggcacgagaccaggagaccttgcattcacatggcattcga
cggaatggagacagtgcttatctctacctgctgtcagcccgcaacacatcactcaaccct
caagagctgcagcggcagcggcagctgcgcatgttggaagatttgggcttcaaggacctc
accctgcagccacggggtcccttggaacctgtccttcccaagcccaggacccaccaggag
acggggcagccagatgcagccccagagtcaccaccggtgggctggcagtgccctggctgc
acgttcatcaacaaacccacacggcctgggtgtgagatgtgctgccgtgcaaggcctgag
gcctaccagatccctgcctcgtaccagcctgatgaggaggagcgagcacgcctggctggt
gaggaggaggcgctgcgccagtatgagcagcggaaacagcagcagcaggaggggaactac
ctgcagcacgtgcagctggagcagaggagcctggtgctgaacaccgaacctgctgagtgc
cctgtgtgctactcagtgctggcacccggtgaggccgtggtgctgcgtgagtgtctgcac
accttctgcagggagtgcctgcagggtaccatccgaaacagccaggaggcggaggtatcc
tgccccttcattgacaacacctactcatgccctggcaagctgctggagagggagatccgg
gcgctcctgtcccctgaggactaccagcgtttcctggacctgggtgtgtccatcgcagag
aatcgaagcaccttgagctaccactgcaagacccccgactgcaggggctggtgcttcttt
gaggatgacgtcaacgagttcacctgtcctgtgtgcacccgcgtcaactgtctgctctgc
aaggccatccacgagcgcatgaattgcagagagtaccaggatgacctggcccatcgggct
cggaatgatgtggctgcccagcagacaactgagatgctgagggtgatgctgcagcaaggc
gaggccatgtactgcccacagtgccggattgtggtgcagaagaaggatggctgtgactgg
atccgctgtactgtctgccacactgagatctgctgggtcaccaagggtccacgctggggc
cctgggggcccaggggacaccagtggtggctgccgctgccgggtcaatgggattccatgc
catccaagctgtcaaaactgccactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (11)   
   Pfam (11)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system