KEGG   Rattus norvegicus (rat): 60384
Entry
60384             CDS       T01003                                 
Symbol
Copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    60384 (Copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    60384 (Copb2)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    60384 (Copb2)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   60384 (Copb2)
SSDB
Motif
Pfam: Coatomer_WDAD WD40 NBCH_WD40 Helicase_dom4_arc WD40_2
Other DBs
NCBI-GeneID: 60384
NCBI-ProteinID: NP_068533
RGD: 628746
Ensembl: ENSRNOG00000060723
UniProt: O35142
Position
8:108040687..108062810
AA seq 905 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRATAQQEPDGKPASSPVIMASQTTHKEEKSFQELEDDLDTMELEDIDTTDINLDE
DILDD
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgcctcttcgacttgacatcaagagaaagctaactgctaggtctgatcgggttaagagt
gtggatttgcatccgactgagccatggatgctggctagtctttacaatggcagtgtgtgt
gtttggaatcatgaaactcagacgctggtgaagacctttgaagtgtgtgatctccctgtt
cgagctgcgaagtttgtcgcaaggaagaactgggtggtgacaggagcagatgatatgcag
attagagtgttcaattataacaccctggagagggtgcacatgtttgaagcacactcggat
tacatccgttgcattgctgttcatcccacccagccgttcattctcacaagcagtgatgac
atgcttattaagctctgggactgggacaaaaaatggtcttgttcacaagtgtttgaagga
cacacgcattatgttatgcagattgtgataaaccccaaagataacaatcagtttgccagt
gcctctctcgacaggaccatcaaggtgtggcagctgggctcttcatcaccaaacttcacg
ctggagggacatgaaaaaggcgtgaattgcattgattactacagtggtggtgataagcca
tacctcatttcaggtgcagatgaccggctcgttaaaatatgggattatcagaataaaact
tgtgtgcagaccctggagggacatgcccagaatgtgtcatgcgcaagcttccatcctgag
ctgcccatcatcatcacagggtcagaagacggaacggtgcgaatctggcactccagcacc
taccggctggagagcacactgaattacggaatggagcgagtgtggtgtgtggccagtctg
agaggctccaacaatgtcgctctgggctacgatgaagggagcatcattgttaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatctgggccaagcattca
gaggtccagcaggccaacctgaaagcaatgggtgacaccgaaattaaagatggagaaaga
ctgccactagcagtaaaggatatgggcagctgtgaaatatatccacagaccattcagcac
aatcctaatgggaggtttgtcgtggtgtgtggtgatggagaatatatcatctacacagca
atggccttgagaaacaagagctttggatctgcccaggagtttgcatgggcccacgattct
tcagagtatgcaataagagaaagcaacagtgttgtaaagatatttaagaactttaaggaa
aagaaatcatttaaacctgattttggagctgaaagtatctatgggggcttcttgctggga
gtcaggtctgtaaatggcttagcattctatgactgggagaataccgaactcatccgcaga
attgaaattcagcccaagcacatcttctggtctgactctggagagctggtctgtattgcc
accgaggagtcattttttattcttaaatatctgtcagaaaaagtcttggctgcacaggaa
acccacgagggagttactgaggatggcattgaggacgcctttgaggttcttggtgaaatt
caggaaattgtgaaaactgggctgtgggtaggtgactgcttcatctacacaagttctgtg
aacagattaaactattatgtgggaggcgagattgtcaccattgcccacttggacaggaca
atgtaccttctgggctatattccaaaagacaataggctttatctgggagataaagaattg
aacatagttagctactccctgttagtttcagtcctggaataccagactgctgtcatgcgg
agggatttcagcatggctgataaggtgctccctactatccccaaagaacagaggaccaga
gttgcacactttttggaaaagcagggcttcaagcagcaagcactcacagtatccacagat
cctgaacatcgttttgagcttgctcttcaacttggggagctgaaaattgcttaccagtta
gcagtggaggcagagtcggagcagaagtggaaacaacttgccgaacttgccattagtaaa
tgtcagttcagcctagcccaggagtgtttgcaccatgcccaggactacggtggtctgctg
ctcttggccactgcctctggaaacgctagtatggtgaacaagctggcagaaggtgcggag
agagatggcaaaaataacgtggcattcatgagctattttttacagggcaagcttgatgct
tgcctagagctcttgatcagaacaggaagactcccagaagccgccttcctggcccgaact
tacttacccagccaggtctcaagggtagtgaagttgtggagggagaatctctcaaaagtc
aaccagaaagcagcagaatccctcgctgaccccacagagtatgaaaaccttttccctgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggagacacatgcggatctgtggcca
gccaagcagtaccctcttgtcacgccaaatgaagagagaaatgttatggaagaggcaaaa
ggctttcagccctcaagagccacagctcagcaggaacctgatgggaaacctgcttctagc
ccagttatcatggcctcccaaaccactcacaaagaagaaaagagtttccaggaactagaa
gatgatttagataccatggaattagaggatattgatacaacagacatcaatctggatgaa
gatattctggatgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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