KEGG   Rattus norvegicus (rat): 60562
Entry
60562             CDS       T01003                                 
Symbol
Stx6
Name
(RefSeq) syntaxin-6
  KO
K08498  syntaxin 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    60562 (Stx6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    60562 (Stx6)
Membrane trafficking [BR:rno04131]
 SNARE
  SNAP-25[C] (Qc)
   STX6
    60562 (Stx6)
SSDB
Motif
Pfam: Syntaxin-6_N SNARE ATPase ERM_helical
Other DBs
NCBI-GeneID: 60562
NCBI-ProteinID: NP_113853
RGD: 61915
Ensembl: ENSRNOG00000003402
UniProt: Q63635
Structure
Position
13:69882647..69928895
AA seq 255 aa
MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWD
LEDLDETISIVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSASSVQALAERKNR
QALLGDSSSQNWDAGVTDRYGRLDRELQLANSHFIEEQQAQQQLIVEQQDEQLELVSGSI
GVLKNMSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAI
LFAVLLVVLTLFLVL
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtccatggaggaccccttctttgtagtgaaaggagaggtacagaaagcagtcaacact
gcccagggattgttccagagatggacggagcttctgcagggcccctccgcagcaacgagg
gaagagatcgactggaccaccaacgagctgaggaacaatctccgcagcatagagtgggat
ctggaggacctggatgaaaccatcagcatagttgaagcaaatcctagaaaattcaacctg
gatgcgactgaattgagcataagaaaagccttcatcacaagtactcggcaaattgtcagg
gacatgaaggatcagatgtcagcttcatctgtgcaagcgttggcagaaaggaaaaacaga
caggcgctactaggagatagcagcagccagaattgggatgctggagtgacggatcgatat
gggcgccttgatcgggagctgcagctggccaactcccatttcatcgaggagcagcaggca
cagcagcagttgattgtggaacagcaggatgagcagttggagctggtctctggcagcatc
ggggtgctgaagaacatgtcccagcgcatcggaggggagctggaggaacaggcagtcatg
ctggatgatttctctcacgagttggagagcactcagtctcgactggacaacgtgatgaag
aaacttgcaaaagtgtctcacatgaccagtgatcggcgccagtggtgtgccatagccatc
ctcttcgcggtcctgctggtcgtgctgaccctcttcctagtgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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