KEGG   Rattus norvegicus (rat): 63868
Entry
63868             CDS       T01003                                 
Symbol
Hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
rno04940  Type I diabetes mellitus
rno05134  Legionellosis
rno05152  Tuberculosis
rno05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    63868 (Hspd1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    63868 (Hspd1)
   05152 Tuberculosis
    63868 (Hspd1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    63868 (Hspd1)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    63868 (Hspd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    63868 (Hspd1)
   03110 Chaperones and folding catalysts [BR:rno03110]
    63868 (Hspd1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    63868 (Hspd1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    63868 (Hspd1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     63868 (Hspd1)
Messenger RNA biogenesis [BR:rno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     63868 (Hspd1)
Chaperones and folding catalysts [BR:rno03110]
 Heat shock proteins
  HSP60 / Chaperonin
   63868 (Hspd1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    63868 (Hspd1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   63868 (Hspd1)
  Exosomal proteins of other body fluids (saliva and urine)
   63868 (Hspd1)
  Exosomal proteins of breast cancer cells
   63868 (Hspd1)
  Exosomal proteins of colorectal cancer cells
   63868 (Hspd1)
  Exosomal proteins of bladder cancer cells
   63868 (Hspd1)
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-GeneID: 63868
NCBI-ProteinID: NP_071565
RGD: 621314
Ensembl: ENSRNOG00000014525
UniProt: P63039 A0A482IDN3
Position
9:complement(64073610..64084332)
AA seq 573 aa
MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
DIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKG
KGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEAVVTEIPKEEKDPGMGAMGGMGGGMGGGMF
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgcttcgactacccacagtccttcgccagatgagaccagtgtctcgggcactggctcct
catctcactcgggcctatgccaaagatgtaaaatttggtgcggatgctcgagccttaatg
cttcaaggtgtagaccttttagccgatgctgtagctgttacaatggggccaaagggaaga
acagtgattattgaacagagttggggaagtcccaaagtaacaaaagatggggtcactgtt
gcaaagtcaattgatttaaaggataaatacaaaaatatcggagctaagcttgttcaggat
gttgccaataacacaaatgaagaggctggggatggcaccaccactgccactgttctggca
cggtctattgccaaggagggctttgagaagatcagcaaaggggctaatccagtggaaatc
cggagaggtgtgatgttggctgttgatgctgtaattgctgaacttaagaaacaatctaaa
cctgtgacaacccctgaagaaattgctcaggttgctacaatttctgcaaacggagacaaa
gacattgggaacatcatttctgatgcaatgaagaaggttggaagaaagggtgtcatcaca
gtgaaggatggaaaaaccctgaatgatgagctagaaattattgaaggcatgaagtttgat
agaggatatatttccccatattttattaacacatcaaaaggtcaaaaatgtgaattccaa
gatgcctatgttttgttgagtgaaaagaaaatttctagtgttcagtccattgtacctgct
cttgaaattgccaatgctcaccggaagcccttggtcataattgctgaagatgttgatgga
gaagctcttagcacactggttttgaacaggctaaaagttggtcttcaggttgtagcagtc
aaagctccagggtttggggacaacaggaagaaccagcttaaagatatggctatcgctact
ggtggtgcggtgtttggagaagagggtttgaatctaaatcttgaagatgttcaagctcat
gatttagggaaagttggagaggtcatcgtcaccaaagatgatgccatgcttttgaaagga
aaaggtgacaaagctcacattgaaaaacgtattcaagaaatcactgagcagctagacatc
acaactagtgaatatgagaaggaaaagctgaacgagcgacttgctaaactctcagatgga
gtagctgtgttgaaggttggagggacaagtgatgttgaagtgaatgagaagaaagacaga
gttacagatgctctcaatgctacaagagcagctgttgaagaaggcattgttctaggaggg
ggctgtgctctacttcggtgcatcccagccttggattcattaaagcctgctaatgaagat
cagaagataggtatagaaattattaaaagagcacttaaaattcctgcaatgacaattgct
aagaatgcaggtgttgaaggatctttgatagttgaaaaaattctgcagagttcctcagag
gttggctatgatgccatgcttggagattttgtgaacatggtggaaaagggaatcattgat
ccaacaaaggttgtaagaactgctttactggatgctgctggggtggcctccctgctaact
acagccgaagctgtagtgacagaaattcctaaagaagagaaggaccctggaatgggtgca
atgggtggaatgggagggggtatgggaggtggcatgttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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