KEGG   Rattus norvegicus (rat): 63996
Entry
63996             CDS       T01003                                 
Symbol
Smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    63996 (Smc1a)
   04114 Oocyte meiosis
    63996 (Smc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    63996 (Smc1a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    63996 (Smc1a)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    63996 (Smc1a)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 ABC_tran Mce4_CUP1
Other DBs
NCBI-GeneID: 63996
NCBI-ProteinID: NP_113871
RGD: 61991
Ensembl: ENSRNOG00000003139
UniProt: Q9Z1M9
Position
X:24582732..24627462
AA seq 1233 aa
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGGSQGE
ESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgggtttcctgaaactgattgagattgagaactttaaatcgtacaagggtcgacaaatt
atcggaccatttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgccatcagctttgtgcttggtgaaaaaaccagcaacctgagggtaaagacc
ctgagggacctgatacacggagctcctgtgggcaagccggctgccaaccgagcctttgtc
agcatggtctactccgaggagggtgctgaggaccgcacctttgcccgagtcattgtaggg
ggctcttctgagtacaagatcaataacaaagttgtccagctacatgaatacagtgaagag
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgcagtg
gaatctattgccatgaagaaccccaaggagaggacagctttatttgaagaaattagtcgc
tctggggaacttgcacaggagtatgacaagcgaaagaaagaaatggtgaaggctgaagaa
gacacacagtttaattatcatcgcaagaaaaatattgcagctgaacgcaaggaggccaaa
caagaaaaggaagaggctgaccgctaccagcgcctgaaggatgaggtagtacgcgcacag
gtacaattgcagctttttaaactctaccacaacgaagtggagattgagaagctcaacaag
gaactggcctcgaagaacaaggaaattgagaaggacaaaaagcggatggacaaggtagag
gatgaactgaaggagaagaagaaagagctgggcaaaatgatgcgggaacagcagcagatt
gagaaggagatcaaggaaaaggactcagaattgaatcagaagaggcctcagtacatcaaa
gcaaaagagaatacatcccacaaaatcaagaagcttgaagcagccaagaaatctctgcag
aatgctcagaaacattataagaaacgtaaaggtgacatggatgagctggagaaagagatg
ctgtcagtggagaaggcccgacaggagtttgaagagcggatggaggaagagagtcagagt
caaggcagagacttgaccctggaggagaaccaggtaaagaaataccaccgattaaaagag
gaagctagcaagagagcagccactttggctcaggagctggagaagtttaatcgagaccag
aaagctgaccaggaccgtctagatctagaagagcggaagaaagtagagacagaggccaag
atcaagcaaaaactgcgggagattgaagagaatcagaaacggattgagaagctagaggaa
tatattaccactagcaagcagtctctagaggaacagaagaagctagagggagaattgaca
gaagaagtagagatggccaagcgtcgtattgatgagatcaataaggagctgaaccaggtg
atggagcaattgggggatgcgcgcattgaccggcaggagagcagccgccagcagaggaag
gcagaaataatggaaagcatcaagcgtctctaccctggttctgtgtatggccgcctcatt
gacctctgccagcctacacaaaagaagtatcagattgctgtgaccaaggttttaggaaag
aacatggatgctattattgtagactccgagaagacaggtcgggattgtattcagtatatc
aaggagcaacgtggagagcctgagaccttcttgcctcttgactacctggaggtgaaacct
actgatgagaaactccgagaactgaagggggccaagctagtgattgatgtgattcgctat
gagccacctcacatcaaaaaagctctgcagtatgcttgtggcaatgcccttgtttgtgac
aatgtggaggatgcgcgacgaattgcctttggaggtcaccaacgccacaagacagtggca
ttggatggcaccctgttccagaagtcaggagttatctctggtggagccagtgatctcaag
gcaaaggcacgacgctgggatgagaaggcagtagacaaactaaaagaaaaaaaagaacgt
ttgacggaggagctaaaagagcagatgaaggcaaaacgaaaagaggcagagctgcgtcag
gtgcagtctcaggcccatgggctacaaatgcggctgaagtactcacagagtgacctagaa
cagactaagacaaggcatcttgccctgaatctccaggaaaaatctaagctggagagtgaa
ctagccaacttcgggcctcgaattaatgatatcaagagaatcatacagagccgagagagg
gaaatgaaagacttgaaggagaagatgaaccaggtggaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgtaacatccgcgaatttgaggaagaaaaggtgaagcggcag
aatgaaattgccaagaaacgcttggaatttgagaatcagaagactcgcttgggcatccag
ttggattttgaaaagaatcagttgaaggaggaccaggataaagtacacatgtgggagcag
acagtaaaaaaggatgaaaatgagatagaaaagcttaagaaggaggagcaaagacacatg
aagataatagatgaaaccatggctcagctccaagaccttaagaatcagcacctggccaaa
aagtcagaagtgaatgacaagaatcatgagatggaagaaattcgcaagaagcttgggggt
gccaataaggaaatgactcacttacagaaggaagtgacagccattgagaccaagcttgaa
cagaagcgcagtgaccgccacaacctgctacaggcctgtaagatgcaggacatcaaattg
ccactgtcaaagggcaccatggatgatattagtcaggaagaaggtggctcccagggagaa
gagtcagtgagtggttcccagagaacatctagtatctatgcacgagaggccctcattgag
attgactacggtgacctgtgtgaagatctgaaggatgcacaggcggaagaagaaatcaag
caagagatgaacacactccagcaaaagctgaatgagcagcagagtgtgcttcagaggatt
gctgcccctaacatgaaggccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgaatttgaggcagcacgaaagcgagcaaagaaagccaagcaggcatttgaa
cagataaagaaggagcgctttgaccgattcaatgcttgttttgaatctgtggctaccaat
attgatgagatctacaaggctctgtcccgtaacagcagtgcccaggcattcttgggcccc
gagaatcctgaagagccctatttggatggtatcaactacaactgtgtagctcctggcaaa
cgtttccggcctatggacaatttgtcaggcggggagaagacagttgccgcactggccttg
ctttttgccattcacagctacaagccagcccccttcttcgtcctggatgagattgatgct
gccttggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcaacttgc
aacttccaggccattgttatctctctcaaggaggaattctacaccaaggctgagagcctc
attggagtctatcctgagcaaggagactgtgtgatcagcaaagtcctgaccttcgacctc
accaagtatccagatgccaaccctaaccccaatgaacaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system