KEGG   Rattus norvegicus (rat): 641525
Entry
641525            CDS       T01003                                 
Symbol
Pcdhgc5
Name
(RefSeq) protocadherin gamma-C5
  KO
K16497  protocadherin gamma subfamily C
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    641525 (Pcdhgc5)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   641525 (Pcdhgc5)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_tail Cadherin_C_2
Other DBs
NCBI-GeneID: 641525
NCBI-ProteinID: NP_001157760
RGD: 2312582
Ensembl: ENSRNOG00000063070
UniProt: C6JUM5
Position
18:29898430..29917566
AA seq 944 aa
MGPMASPQVTGKRQVLYMLSLCCCGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKVADLL
SRRLRLGSEENGRYFSLSLMSGALAVNLKIDRESLCGASTSCLLPVQVVTEHPLELTRVE
VEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSL
NVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTSLISVIVLDINDNAP
TFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVKNLFGLDPNTG
AIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVNPVL
ESTPVGTVVGLFNVRDRDSGRNGEVILETTPNLPFQIKPSENHYSLLTSQPLDREVTSHY
TIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVAASD
PDEGDNARLTYSIVGSQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDSG
SPRLYANTSLHVFVLDQNDNAPTVLHPRSGREFSAPQRLPRSAPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDAEEMPKSSDFLTHPPERSDLTLYLIVALAAVSLLSLVTFTFMSAKCLRRH
EDRDRGGGQCCRGQDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALALEPEALRSRSSTLRERSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggggcctatggcatcaccacaggtcactggtaaacggcaagtgctgtatatgttgtcc
ttgtgctgctgtggctgggtgtctgggcagcttcgttattcagtggtggaggaatcagag
ccggggactttggtggggaacgttgctcaagatctgggcttaaaggtggcagatctgttg
agtcgcaggctgagactgggctctgaggagaacgggcgctatttttccctgagcttgatg
agtggagctttggcagtgaatctaaaaattgaccgagagagcctgtgtggagccagcacg
agctgcctgctgcctgtacaggtggtaaccgaacaccccctggagctcacccgggtagag
gtagagatcctagatctcaacgacaactctcctagctttgccactcctgagcgagagatg
cgcatctcagaatcagcggcacctggagccaggttcccactggacagtgcccaagaccca
gacgtgggcaccaatactgtgagcttttatactctaagccccagcagtcacttctctctg
aatgtgaagaccctaaaagatgggaagctcttcccagagctagtgctagagcagcagcta
gaccgggaagcccaggcaaggcatcagctggtactcactgctgtggatgggggaacccca
gcccgctcagggaccagccttatctctgtcattgtgctggacatcaatgataatgcccca
accttccagtcctcagttctacgtgtgggactcccagagaacacacccccggggaccctg
ctgctccgtctcaatgccactgatccagacgagggcaccaatggccaactagactactct
ttcggagaccatacatctgaagcagtgaagaatctctttggcctggatcctaacactgga
gcaatccacgtgttgggtccggtagattttgaggaatcaaatttctatgaaattcatgca
agagctcgagaccagggacagccagccatggagggccactgtgtaatccaggtggatgta
ggggatgctaacgacaatccccctgaggtgctgctggcatctttggtcaaccctgtccta
gagagcacacccgtgggcacagttgtggggttgtttaatgtgcgggaccgagactcaggt
agaaatggtgaggtgatcctggagacaactccaaacctgccatttcagatcaagccttcc
gagaaccattactcactgctcaccagccagcctttggaccgagaggtcacatcccattac
accatcgacctgctggccagtgatgctggatcacctcccctgcatacacatctcaccatc
aggctgaacatttcagatgttaatgacaacgcaccccatttcacccaacagctctacact
gcttatatcccagaaaaccggccaccaggctctctcctctgtactgtggctgcctctgat
ccagatgagggggataatgcccgcctcacctattctattgtgggaagtcaaattcaggga
gccccagcctcctccttcgtgtatgtcaaccccgaagatggacgagtctttgcccagcgg
acctttgactatgaattactgcagatgctgcagattgtggtgggggtccgagattccggc
tctccccgactgtatgctaacacatctctccatgtgtttgtccttgatcagaacgataac
gccccaactgtactgcacccacgatctggcagggagttctcagcccctcagcgtctcccc
cgatctgctcctcctggttctctggtcaccaaggtgacagctgtggatgctgatgctggt
cacaatgcatggctctcttactctctattacctcagtccacagcccctggactgttcctc
gtatctacacacactggtgaggtgcgcacagcccgggccttattggaggacgactctgat
acccaacaggtggtggtcctggtgagggacaatggtgacccttcactatcctccacagca
acagtattgctggttctggaggacgaggatgcagaggaaatgcccaaatccagcgacttc
ctcacacaccctcccgagcggtcagacctcaccctttatcttattgtggcgctggcagct
gtcagtctcttatccctagttaccttcactttcatgtcagctaagtgtctgcggaggcat
gaagatagggaccggggtgggggccagtgctgcaggggccaggactcgccctccagggag
ttctataaacagtccagtcccaaccttcaggtcagctcagatggcactctaaagtacatg
gaggtgaccctgcggcccacagattctcagagccattgctacaggacgtgcttttctcca
gcctccgatggcagtgacttcactttcctcaggcccctcagcgttcagcagccctcagcc
ttggcgctggagcccgaggccttgcgttcccggtctagtacgctgcgggagcggagccag
caagccccgcccaacactgactggcgtttctctcaagcccagagacccggcacgagcgga
tcccaaaatggggatgaaaccggcacctggcccaacaaccagttcgatacagagatgctg
caagccatgatcttggcctctgccagtgaagccgctgatgggagctccactctgggaggg
ggcactggcactatgggtttgagcgctcgatatggaccccagtttaccctgcagcacgtg
cctgactaccgccagaacgtgtacatccctggcagcaatgccacactgaccaacgcagct
ggcaaacgagatggcaaggctccggcaggcggcaatggcaacaagaagaagtcgggcaag
aaagagaagaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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