KEGG   Rattus norvegicus (rat): 64156
Entry
64156             CDS       T01003                                 
Symbol
Uba52
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03010  Ribosome
rno04120  Ubiquitin mediated proteolysis
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno05012  Parkinson disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    64156 (Uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    64156 (Uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    64156 (Uba52)
   04137 Mitophagy - animal
    64156 (Uba52)
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    64156 (Uba52)
   05167 Kaposi sarcoma-associated herpesvirus infection
    64156 (Uba52)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    64156 (Uba52)
   05022 Pathways of neurodegeneration - multiple diseases
    64156 (Uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:rno03011]
    64156 (Uba52)
   04121 Ubiquitin system [BR:rno04121]
    64156 (Uba52)
Ribosome [BR:rno03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    64156 (Uba52)
  Archaea
    64156 (Uba52)
Ubiquitin system [BR:rno04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   64156 (Uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL Dsc3_N
Other DBs
NCBI-GeneID: 64156
NCBI-ProteinID: NP_113875
RGD: 68344
Ensembl: ENSRNOG00000019971
UniProt: P62986 Q6P7R7
Structure
Position
16:18952583..18954780
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKVK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacgggcaagaccatcactcttgaggtcgagcccagt
gacaccatcgagaatgtcaaggccaagatccaagacaaggaaggcatcccccctgaccag
cagagactgatctttgctggcaaacagctggaggatggccgcaccctgtccgactacaac
atccagaaagagtccaccttgcacctggtgctgcgtcttcgcggtggcatcatcgagccg
tcccttcgtcagcttgcccagaagtacaactgtgacaagatgatctgccgcaagtgctac
gcacgcctgcacccccgtgcagtcaactgccgcaagaagaagtgcggccacaccaacaac
ctgcgccccaagaagaaggtcaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (90)   
   RefSeq(nuc) (6)   
   GenBank (42)   
   EMBL (42)   
3D Structure (1)   
   PDB (1)   
Protein domain (10)   
   Pfam (10)   
All databases (128)   

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