KEGG   Rattus norvegicus (rat): 64196
Entry
64196             CDS       T01003                                 
Symbol
Safb
Name
(RefSeq) scaffold attachment factor B1
  KO
K25092  scaffold attachment factor B
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    64196 (Safb)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    64196 (Safb)
SSDB
Motif
Pfam: RRM_1 SAP RRM_5 DUF4716
Other DBs
NCBI-GeneID: 64196
NCBI-ProteinID: NP_071789
RGD: 620613
Ensembl: ENSRNOG00000050543
UniProt: A6KQX0
Position
9:1504657..1525545
AA seq 940 aa
MAETLSGLGDSGAASAAAVSSAASETGTRRLSDLRVIDLRAELRKRNLDSSGNKSVLMER
LKKAIEEEGGNPDEIEVISEGNKKMPKRPSKGKKPEDEGVEDNGLEENSGDGQEDVETSL
ENLQDMDMMDISVLDEADIDNGSVADCVEEEEEATLPEGLGDSTELVEGDSKGLPEQLQE
HAIDDKEAINNVDTSSSDFTILQEMEEASLEPENEKILDILGETCKSEPVKEEGSELEQP
FAQATSSVGPDRKLAEEEDLFESCGHPEEEEEEEEEEEQEEEQEEEGDLALASSSKSESS
STRCQWSEADALLAVVKREPAEAPGGGTGMDREPVGLEEPVEQSSTAAQLPETTSQELVR
APTAAPSPEPRDSKDDVKKFAFDACNDVPAAPKESSASEGADQKMSSVEDDSDTKRLSRE
EKGRSSCGRNFWVSGLSSTTRATDLKNLFSRYGKVVGAKVVTNARSPGARCYGFVTMSTA
EEATKCINHLHKTELHGKMISVEKAKSEPAGKRVPDRRDGDSKKEKTSTSDRSANLKREE
KGDRKDDAKKTDDGSTEKSKDADDQKPGPSERSRTTKSGSRGTERTVVMDKSKGVPVISV
KTSGSKERASKSQDRKSVSREKRSVVSFDKVKESRKSRDSESRRERERERSEREQRLQAQ
WEREERERLEIARERLAFHRHRLERERMERERLERERMHVEQERRREQERIHREREELRR
QQELRYEQERRPAVRRPYEVDGRRDDAYWPEAKRAALDDRYHSDFSRQDRFHDFDHRDRG
RYPNHSVDRREGSRSMMGDREGQHYPERHGGPERHGRDSRDGWGYGSNKRLSEGRGLPPP
PRRDWGEHGRRLEDDRAWQGTADGGMMERDHKRWQGGERSMSGHSGPGHMMNRGGMSGRG
SFAPGGASRGHVIPRGGMQAGFGGQSRGSRPSDARFTRRY
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggcggagactctgtcgggtttaggagactcgggtgcggcaagcgcagcggccgtgagc
tccgcggcgtcagagaccgggacgcggcggctcagcgacctgcgggtgatcgacctgcgg
gcggagctgcggaagcgaaacctcgactcgagcggcaacaagagcgtgctgatggagcgg
cttaagaaggccattgaagaggaaggtgggaatcctgatgaaattgaagtcatctcagaa
ggcaacaagaagatgcctaagaggcccagcaaagggaagaaaccagaagacgagggtgtg
gaggacaacgggctcgaggagaattctggggatgggcaggaggatgtggaaaccagcctg
gagaacctgcaagacatggatatgatggacatcagtgtgctggatgaggctgacattgat
aatggcagcgtggcagactgtgtggaggaagaagaggaggccacactccctgagggccta
ggagacagcactgaactggtagaaggcgactcgaaggggctcccagaacagctgcaggag
catgctatagatgacaaggaagccattaacaatgtagatacatcatcatctgacttcacc
atcctgcaggagatggaagaggcatctttggagccagaaaatgagaaaatactcgacatt
ttgggggaaacttgtaaatctgagccagtaaaagaagaaggttcggagctggagcagccc
tttgcccaggccacgagtagcgtggggccagacaggaagctggcggaggaagaggaccta
tttgagagctgcggccacccggaagaggaagaagaagaggaggaagaagaggagcaggaa
gaggagcaggaggaggagggagatttagctttggccagcagcagcaagtctgagtcttca
agcactcgatgtcagtggagcgaggcagacgccctgttagcagtagtgaaaagggagccg
gcagaggcgcctggcggaggcactgggatggaccgcgagcctgtagggctagaggagcca
gttgaacagagtagcacggctgcccagctcccggagaccaccagccaggagctggtgcga
gcgcccacggcagccccgagccctgagccccgagatagcaaagacgacgtgaagaagttt
gcttttgacgcttgtaatgacgtccctgcggctcctaaagagtcctcagccagtgagggc
gctgatcagaaaatgagttctgtggaagatgactcggatacaaaaaggctttccagagag
gagaagggtcgcagcagctgtggtaggaatttctgggttagtggcctttcatctacgacc
agagccacagatctgaagaacctttttagcagatacgggaaggtggtgggagctaaggtt
gtgacgaacgcccggagtcccggagctcgctgttacggctttgtcactatgtccacagct
gaagaggcaacaaagtgcattaaccatttgcataagactgagctgcatggcaagatgatc
tcggtggaaaaggccaaaagtgagcccgctggcaaaagagtacctgacaggcgagatggc
gacagcaagaaagagaagaccagcaccagtgacagatctgcaaaccttaagagggaggag
aaaggtgacagaaaagacgatgccaagaagacggatgatgggagcacagagaagagcaag
gatgcagatgaccaaaagcctgggccttcagagcgctctcgaacaaccaagtcaggaagc
cgtggcactgagcgtactgtggtgatggacaagtccaaaggtgtgcctgtcatcagtgtg
aagacttctggttctaaagagagagcctccaaaagtcaggaccgaaagtctgtcagccgg
gagaagcggtctgttgtgtcctttgacaaggttaaagagtctcgaaagtccagagactcg
gagtcacggagggagcgggagcgggagcgcagtgagcgggagcaaaggctgcaggcccag
tgggagcgggaggagcgagagcggctggagattgcccgggagcgcctggctttccaccga
cataggctggagcgtgaacgcatggagagggaacggttggagcgggagcgcatgcatgtg
gaacaggagcggaggcgtgagcaagagcgcattcaccgagagcgagaggagcttcggcgt
cagcaggaactgcgctatgaacaggagcggaggcctgctgtgcgcaggccctatgaagta
gatggccggcgagatgatgcctattggccagaagctaaacgggctgcgctggatgaccgt
taccactcagacttcagtcgccaggaccgctttcatgacttcgaccacagagacagaggc
cgctatcccaaccactctgtggataggagagaaggttcacggtcgatgatgggagacaga
gaaggacagcattaccctgagcgccatggaggacctgaacgccatggccgggactctcga
gatggctggggctatggctcaaacaagagactgagtgaaggccgggggctgccccctcct
cccaggcgtgactggggagagcatggccggagacttgaagatgaccgggcatggcagggc
acagctgatggaggcatgatggagcgtgatcacaagagatggcaaggtggtgagaggagc
atgtctggccactcagggcccggtcacatgatgaatcgtggtggcatgtcagggcgaggc
agttttgcccccggaggagcttcccgtggccatgtgatcccacgtggagggatgcaggca
ggcttcggcggacagagccggggcagcagacccagtgatgcccgcttcacccgccgctat
tga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (42)   

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