KEGG   Rattus norvegicus (rat): 64301
Entry
64301             CDS       T01003                                 
Symbol
Smn1
Name
(RefSeq) survival motor neuron protein
  KO
K13129  survival motor neuron protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    64301 (Smn1)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    64301 (Smn1)
SSDB
Motif
Pfam: SMN_Tudor SMN_YG-box SMN_G2-BD TUDOR
Other DBs
NCBI-GeneID: 64301
NCBI-ProteinID: NP_071954
RGD: 620755
Ensembl: ENSRNOG00000018067
Vega: OTTRNOG00000001091
UniProt: O35876 Q6P684
Position
2:33224115..33235162
AA seq 288 aa
MAMGSGGAGSEQEDTVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDMCETS
DKPKGTARRKPAKKNKNQKKNATAPLKQWKAGDKCSAVWSEDGCVYPATITSVDLKRETC
VVVYTGYGNKEEQNLSDLLSPTCEVANNTEQNTQENESQVSTDDSEHSSRSLRSKAHSKS
KAAPWTSFLPPPPPVPGAGLGPGKPGLRFNGPPPPPPPPPPFLPCWMPPFPSGPPIIPPP
PPISPDCLDDTDALGSMLISWYMSGYHTGYYMGFRQNKKEGKKCSHTN
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcgatgggcagcggcggcgcgggctctgagcaggaagacaccgtgctgttccggcgt
ggcaccggccagagtgatgattctgacatttgggatgatacagcattgataaaagcttac
gataaagccgtggcttcctttaagcatgctctaaagaacggtgacatgtgtgaaacttca
gataagccaaaaggcacagctagaagaaaacctgctaagaagaataaaaaccaaaagaag
aatgccacagctccattgaaacagtggaaagctggtgacaaatgctctgccgtttggtcg
gaagatggctgcgtttacccagctaccatcacgtcagttgaccttaagagagaaacctgt
gtcgtggtttatactggatatggaaacaaagaggagcaaaacctatctgatctgctttcc
ccgacctgtgaagtagctaacaatacagaacagaacactcaggagaatgaaagccaagtt
tccacagacgacagtgaacactcctccagatcgctcagaagtaaagcacacagcaagtcc
aaagctgctccatggacctcgtttctccctccacctcccccggtgcccggggcgggatta
ggaccaggaaagccaggtctaaggttcaatggcccaccgccgccgccacctccccctccc
ccgttcttgccgtgttggatgcctccgttcccttcaggaccaccaataattcctccaccc
cctcccatatctcccgactgtctggatgacacggatgctctgggcagtatgctaatctct
tggtacatgagtggttaccacactggttactatatgggtttcagacaaaataaaaaagaa
ggaaagaagtgctcacatacaaattaa

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