KEGG   Rattus norvegicus (rat): 64351
Entry
64351             CDS       T01003                                 
Symbol
Ykt6
Name
(RefSeq) synaptobrevin homolog YKT6
  KO
K08516  synaptobrevin homolog YKT6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
rno04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    64351 (Ykt6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    64351 (Ykt6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    64351 (Ykt6)
Membrane trafficking [BR:rno04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    64351 (Ykt6)
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 64351
NCBI-ProteinID: NP_113880
RGD: 70897
Ensembl: ENSRNOG00000014785
UniProt: Q5EGY4 A6IKR3
Structure
Position
14:85041393..85057347
AA seq 198 aa
MKLYSLSVFYKGEPKAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHY
TALDGHLSRYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagccttagtgtcttttacaaaggcgaaccaaaagcggtgcttctcaaa
gccgcgtacgatgtgtcttccttcagtttcttccagaggtccagtgttcaggaattcatg
acctttacaagtcaactgattgtggaacgatcggcgaaaggcagcagagcttctgttaaa
gaacaagagtacctttgccatgtctacgtccggagtgacagtctggcaggtgtggtcatt
gctgacagcgaatacccttccagagtggcctttaccttgctggagaaggtactagatgaa
ttctccaagcaggtcgatagaatagactggccagtaggatcccctgctacaatccattac
acagccctagatggccaccttagtagataccagaacccccgggaggctgatcccatgagt
aaagtgcaggccgaactggatgagaccaaaatcattctgcacaacaccatggagtctttg
ttagagcgaggcgagaagcttgatgacttggtatccaaatcagaagtcctgggaacacag
tcgaaagccttctataaaactgcccggaaacaaaactcatgctgtgcaatcatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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