KEGG   Rattus norvegicus (rat): 64456
Entry
64456             CDS       T01003                                 
Symbol
Spon1
Name
(RefSeq) spondin-1 precursor
  KO
K24427  spondin-1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    64456 (Spon1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Thrombospondin domain-containing proteins
  F-spondins
   64456 (Spon1)
SSDB
Motif
Pfam: TSP_1 TSP1_spondin Spond_N Reeler TSP1_CCN TSP1_ADAMTS
Other DBs
NCBI-GeneID: 64456
NCBI-ProteinID: NP_742064
RGD: 619918
Ensembl: ENSRNOG00000058003
Vega: OTTRNOG00000000852
UniProt: P35446 A0A0G2K775
Structure
Position
1:177363526..177662689
AA seq 807 aa
MRLSPAPLRLSRGPALLALALPLAAALAFSDETLDKVAKSEGYCSRILRAQGTRREGYTE
FSLRVEGDPDFYKPGSSYRVTLSAAPPSYFRGFTLIALKENREGDKEEDHAGTFQIIDEE
ETQFMSNCPVAVTESTPRRRTRIQVFWIAPPTGTGCVILKASIVQKRIIYFQDEGSLTKK
LCEQDPTLDGVTDRPILDCCACGTAKYRLTFYGNWSEKTHPKDYPRRANHWSAIIGGSHS
KNYVLWEYGGYASEGVKQVAELGSPVKMEEEIRQQSDEVLTVIKAKAQWPAWQPVNVRAA
PSAEFSVDRTRHLMSFLTMMGPSPDWNVGLSAEDLCTKECGWVQKVVQDLIPWDAGTDSG
VTYESPNKPTIPQEKIRPLTSLDHPQSPFYDPEGGSITQVARVVIERIARKGEQCNIVPD
NVDDIVADLAPEEKDEDDTPETCIYSNWSPWSACSSSTCEKGKRMRQRMLKAQLDLSVPC
PDTQDFQPCMGPGCSDEDGSTCTMSEWITWSPCSVSCGMGMRSRERYVKQFPEDGSVCML
PTEETEKCTVNEECSPSSCLVTEWGEWDDCSATCGMGMKKRHRMVKMSPADGSMCKAETS
QAEKCMMPECHTIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLEQAEKC
MLPECPIDCELSEWSQWSECNKSCGKGHMIRTRTIQMEPQFGGAPCPETVQRKKCRARKC
LRSPSIQKLRWREARESRRSEQLREESDGEQFPGCRMRPWTAWSECTKLCGGGIQERYMT
VKKRFKSSQFTSCKDKKEIRACNVHPC
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgaggctatctcccgcgcccctgaggcttagccggggtccggcgctgctggccctggcg
ctgcccctggccgcagcgctcgctttctcggatgagaccctggacaaagtggccaagtcg
gagggctactgcagccgcatcttgcgcgcccagggcacacggcgtgagggatacacagag
ttcagcctccgcgtggaaggcgaccctgacttctataagccaggaagcagctaccgagtg
acactctcggctgcccctccctcctacttcagaggcttcacgttaattgctctcaaagag
aaccgcgaaggcgataaggaagaagaccacgcgggcaccttccagatcatagatgaagaa
gaaacccagtttatgagtaactgtcctgtggcagtcactgaaagcacccctcggaggagg
acacggatccaggtgttttggatagcgccacccacagggacaggctgtgtgattctgaag
gccagcattgtacagaaacgcattatctattttcaagacgagggctccctgaccaagaag
ctgtgtgaacaggatcccacacttgatggagtgacggacagaccgatcttagactgctgc
gcctgcggaactgccaagtacagactcacgttttatgggaactggtcggagaagactcat
ccaaaggattaccctcgtcgggctaatcactggtctgccatcattggcggatcccactcc
aagaactacgtgctgtgggagtacggagggtatgccagtgaaggggtcaagcaagttgct
gaacttggctcaccagtaaaaatggaggaagaaattcgacaacagagtgatgaagtcctc
actgtcatcaaagccaaagcccagtggccagcctggcagcctgtcaatgtgagagcagca
ccctcagccgaattctcagtggacaggacacgccacttgatgtccttcctaaccatgatg
ggccccagtcctgactggaacgtgggcctatctgcagaggatctgtgcaccaaggagtgt
ggctgggtccagaaagtggtgcaggacctaattccctgggatgctggcacggacagcggg
gtgacctacgagtcaccaaacaagcccacaattcctcaggaaaaaatccgacccctgact
agtctggaccatcctcagagtcctttctatgacccggaaggtgggtccatcacacaagtg
gccagagtcgtcatcgagagaattgcccggaagggagaacaatgcaacattgtacctgac
aatgtggatgatattgtagccgacctggctccagaagagaaagatgaagatgacacccct
gaaacctgcatctactccaactggtccccatggtcggcctgcagctcttccacttgtgaa
aagggtaagaggatgcggcaacgcatgctgaaggcacagctggacctcagtgtcccctgt
cctgacacccaggacttccagccctgcatgggccccggctgcagcgatgaagatggctcc
acctgtaccatgtcggagtggatcacctggtcaccctgcagtgtctcgtgtggcatgggt
atgaggtcccgggagaggtacgtgaagcagttcccggaagacggctcggtgtgcatgctg
cccacggaagagacagagaagtgcacggtcaacgaggagtgctctcctagcagctgcctg
gtgactgagtggggtgagtgggatgactgcagcgccacctgtggaatgggcatgaagaag
cggcaccgcatggtcaagatgagccccgcggacggctccatgtgcaaggcggagacttcg
caggcggagaaatgcatgatgcctgagtgccataccatcccgtgcttgctgtctccttgg
tccgagtggagcgactgtagcgtgacctgtgggaagggcatgcggacgcgccagcggatg
ctcaagtctctggcagagctgggggactgtaatgaggatctggagcaggcggagaagtgt
atgctgccagagtgccccattgactgcgaactcagcgagtggtcccagtggtctgaatgt
aacaagtcctgtgggaaaggtcacatgattcgaacccggacaatccaaatggaacctcag
tttggaggtgcaccctgcccagagactgtgcaacgcaagaagtgccgtgcccggaaatgc
cttcgcagcccatcgatccagaagctgcgctggagggaggcccgagagagcaggaggagt
gagcagctgagggaagagtcagatggagagcagttcccaggctgtcggatgcgcccgtgg
acagcctggtcagagtgcaccaaactgtgcggaggtgggatccaagaacgctacatgact
gtgaagaagaggttcaaaagctcccagtttaccagctgcaaagacaagaaggagatcaga
gcgtgcaacgtgcacccttgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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