KEGG   Rattus norvegicus (rat): 64516
Entry
64516             CDS       T01003                                 
Symbol
Vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    64516 (Vps45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    64516 (Vps45)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    64516 (Vps45)
SSDB
Motif
Pfam: Sec1
Other DBs
NCBI-GeneID: 64516
NCBI-ProteinID: NP_742069
RGD: 621267
Ensembl: ENSRNOG00000021173
UniProt: O08700 A6K348
Position
2:complement(186244839..186305177)
AA seq 570 aa
MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVDSLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEAAKRLGECVKQVISKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKKRPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAVRLVMLYALHYERHSSNSLPGLIVDLRSKGVAEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRTTPGVRIVLGGTTIHNT
KSFLEEVLASGLHSRSRESSQATSRSASRR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaacgtggtctttgctgtgaagcagtatatttccaaaatgatagaagacagcggaccc
ggcatgaaggtacttctcatggataaagagacgactggtatagtgagcatggtctacaca
cagtcagagattcttcagaaggaagtatacctcttcgaacgaattgattctcaaaatcga
gagatcatgaaacacctaaaagcaatttgtttccttcgacctacaaaggagaatgtggat
tctctgatccaggagctccgaagacccaagtatagcatatattttatttatttcagtaat
gtgatcagcaagagtgacgtgaagtccttggctgaagctgacgagcaggaagttgtggct
gaagttcaggaattttatggagattatattgctgtgaatccacatttgttttccctcaat
atcttgggctgctgtcagggtcgaaattgggatccagcccagctatccagaaccactcaa
gggctgaccgctctccttttgtctctgaagaagtgtcccatgattcgttatcagctttca
tcagaggctgcaaagagactgggagagtgtgttaagcaagtgataagtaaagagtatgaa
ctctttgagttccggcggacagaggttcctccactgcttctcattctggatcgctgcgat
gacgccatcaccccactgctcaaccagtggacatatcaggccatggtccatgaactactg
ggcataaacaacaaccggattgatctttccagagtgccaggaatcagcaaagacttaaga
gaggtggtcctgtccgctgaaaatgatgaattctatgctaataacatgtacctgaacttt
gccgagattggtagcaatataaagaatctcatggaagatttccagaagaagagaccgaaa
gagcagcaaaagctagagtccatagcggacatgaaggcctttgttgaaaattatccacaa
ttcaagaagatgtctgggactgtctcaaagcatgtgacagtcgttggagaactgtctcgg
ttggtcagtgaacgaaacctgctggaggtttcagaggttgagcaagaactggcctgtcag
aatgaccattctagtgctcttcagaatgtgaagagactcctgcagaatccgaaagttaca
gaatttgatgcagttcgcctagtgatgctttatgctctacattatgagcgccacagcagc
aacagcctgccagggctcatagtggacctcaggagtaaaggtgtcgctgagaaatatcgg
aagcttgtgtctgcagttgttgaatatggtggtaaacgggttagaggaagtgacctcttc
agccccaaagatgctgtggctattaccaaacagttcctcaaaggcctgaagggagtggaa
aatgtgtacacccagcaccagccttttctgcatgagaccctggaccatctcatcaaaggg
aagcttaaggaaaacctctatccgtatttaggccccagcacactcagagacaggcctcag
gacatcatcgtgttcgttattggaggagccacctatgaagaggcactgacagtctataac
ctcaaccgtaccactcctggagtgaggatcgttctgggaggaacaacaatacacaacaca
aaaagtttcctagaggaagtcctggcttctgggctgcacagccgcagcagagagagctca
caggccacctcaaggtcagcaagcagaagatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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