KEGG   Rattus norvegicus (rat): 64563
Entry
64563             CDS       T01003                                 
Symbol
Nphs1
Name
(RefSeq) nephrin precursor
  KO
K24496  nephron
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    64563 (Nphs1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   64563 (Nphs1)
SSDB
Motif
Pfam: Ig_3 C2-set_2 I-set Ig_2 ig V-set fn3
Other DBs
NCBI-GeneID: 64563
NCBI-ProteinID: NP_072150
RGD: 620460
Ensembl: ENSRNOG00000020873
UniProt: Q9R044
Position
1:94848261..94876522
AA seq 1252 aa
MGAKRVTVRGARTSPIHRTSSLTPLLLMGMLTSGLAESPVPTSAPQGFWALSENLTAVEG
TTVKLWCGVRAPGSVVQWAKDGLLLGPNPKMPGFPRYSLEGDRAKGEFHLLIEACDLSDD
AEYECQVGRSELGPELVSPKVILSILVSPKVLLLTPEAGSTVTWVAGQEYVVTCVSGDAK
PAPDITFIQSGRTILDVSSNVNEGSEEKLCITEAEARVIPQSSDNGQLLVCEGSNPALDT
PIKASFTMNILFPPGPPVIDWPGLNEGHVRAGENLELPCTARGGNPPATLQWLKNGKPVS
TAWGTEHAQAVAHSVLVMTVRPEDHGARLSCQSYNSVSAGTQERSITLQVTFPPSAITIL
GSVSQSENKNVTLCCLTKSSRPRVLLRWWLGGRQLLPTDETVMDGLHGGHISMSNLTFLV
RREDNGLPLTCEAFSDAFSKETFKKSLTLNVKYPAQKLWIEGPPEGQYIRTGTRVRLVCL
AIGGNPDPSLIWFKDSRPVSEPRQPQEPRRVQLGSVEKSGSTFSRELVLIIGPPDNRAKF
SCKAGQLSASTQLVVQFPPTNLTILANSSALRPGDALNLTCVSISSNPPVNLSWDKEGER
LEDVAAKPQSAPFKGSAASRSVFLRVSSRDHGQRVTCRAHSEALRETVSSFYRFNVLYPP
EFLGEQVRAVTVVEQGQVLLPVSVSANPAPEAFNWTFRGYRLSPAGGPRHRILSGGALQL
WNVTRADDGFYQLHCQNSEGTAEALLKLDVHYAPTIRALRDPTEVNVGGSVDIVCTVDAN
PILPEMFSWERLGEEEEDLNLDDMEKVSKGSTGRLRIRQAKLSQAGAYQCIVDNGVAPAA
RGLVRLVVRFAPQVDQPTPLTKVAAAGDSTSSATLHCRARGVPNIDFTWTKNGVPLDLQD
PRYTEHRYHQGVVHSSLLTIANVSAAQDYALFKCTATNALGSDHTNIQLVSISRPDPPLG
LKVVSISPHSVGLEWKPGFDGGLPQRFQIRYEALETPGFLHVDVLPTQATTFTLTGLKPS
TRYRIWLLASNALGDSGLTDKGIQVSVTTPGPDQAPEDTDHQLPTELPPGPPRLPLLPVL
FAVGGLLLLSNASCVGGLLWRRRLRRLAEEISEKTEAGSEDRIRNEYEESQWTGDRDTRS
STVSTAEVDPNYYSMRDFSPQLPPTLEEVLYHQGAEGEDMAFPGHLHDEVERAYGPPGAW
GPLYDEVRMDPYDLRWPEVQCEDPRGIYDQVAADMDAVEASSLPFELRGHLV
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgggcgctaagagagtcactgtcagaggtgcccggacaagcccaatacacagaacgtcc
agtttgactcccctgctgctcatgggaatgctgacctcaggcctggccgagtcgccagtc
cccacctcagcacctcaaggcttctgggctctgtctgaaaacctgactgcggtggaaggg
acaacagttaagctatggtgcggtgtcagggcccctggcagtgtggtgcagtgggctaag
gatgggctgcttctgggtccaaacccgaagatgccaggcttcccgaggtacagcctggaa
ggagatcgtgctaaaggcgagttccacctgcttattgaagcctgtgacctcagtgatgac
gcagagtatgaatgccaagtcggccgctcagagttgggtcccgagcttgtgtctcctaaa
gtaatcctctccattctagtttcccccaaggtgcttctgttgacccccgaggcaggaagc
acagtgacctgggtagctgggcaggagtatgtggtcacctgtgtgtctggagatgcaaaa
ccagcacctgacatcaccttcatccagagtggacgaactatattggacgtctcctccaat
gtgaatgagggatcagaggagaaactctgcatcacagaggccgaagccagggtgataccc
cagagctcggataacgggcagttactggtctgtgagggttccaacccagctttggacact
cccataaaggcttcattcaccatgaatattctgtttcccccaggacctcctgtcattgat
tggccaggcctgaatgaggggcatgtgagggcaggggagaacctggagctgccctgcaca
gccagaggtggcaatccacctgctaccctgcagtggctgaagaacggtaaaccagtgtcc
acagcctggggcaccgagcatgcccaggcagtggcccacagcgtgctggtgatgactgta
cgacctgaagaccatggagctcggctcagctgtcagtcctacaacagcgtgtctgcaggg
acccaggagagaagcatcacactacaggtcacctttcccccaagcgccattaccatcctg
ggatctgtatcacaatcggagaacaagaacgtgaccctttgctgcctgaccaagtccagt
cgcccacgggtcctgctgcgatggtggttgggtggacggcagctgctgcccacagatgag
acagtcatggatggcctgcatggtggccacatctccatgtccaatctcacattcttggtg
cggagagaagacaatggcctgcccctcacctgtgaagccttcagtgacgccttcagcaag
gagaccttcaagaagtcactcaccttgaatgtgaaataccctgcccagaagctgtggatt
gaggggcccccagagggacagtacatccggactgggactcgggtgaggctggtatgcttg
gccatcggaggcaacccagacccctccctcatctggtttaaggattcacgtccggtgagc
gagccccggcagccccaggagccccggcgtgtgcagctgggcagtgtggagaagtccggg
agcactttctcccgcgagctggtgttgatcataggtccgccggacaaccgagccaagttc
tcctgcaaggcgggtcagctcagtgcgtctacgcagctggtggtgcagttccccccaacc
aacctgaccatcctggccaactcgtccgcgctgcgcccaggcgacgccttgaacttgacc
tgcgtcagcatcagcagcaaccccccagtcaacttgtcttgggacaaggaaggagagagg
ctggaagatgtggctgcaaaaccccagagtgcaccgttcaaaggctccgctgcatccagg
agtgtttttctcagagtgtcatcccgagaccacggtcaacgggtcacctgccgggcccac
agcgaggcactccgtgaaaccgtgagctccttctaccgcttcaatgtgctgtatcctcca
gaattcctgggggagcaagtccgggcagtgaccgtggtggagcagggccaggtgctgctg
ccggtgtcggtgtccgctaaccccgcccccgaggccttcaactggaccttccgaggctac
cgcctcagcccagctgggggtccccggcaccgtatcctgtctggaggggctctgcagctg
tggaatgtgacccgagctgacgatggcttttatcagctgcactgccagaactcagagggc
accgctgaggcgctgttgaagctggacgtgcattatgctcccaccatccgtgccctccgg
gaccctactgaggtgaatgttgggggttctgtggacatagtctgcaccgttgacgccaat
cccatcctcccagagatgttcagctgggagagactgggagaagaagaggaggatctgaac
ctggacgacatggagaaagtttccaagggatccacggggcgtctgcggattcgccaagcc
aagctatcccaggctggtgcctaccagtgcatcgtggacaatggggtggctcctgcagcc
agaggactggttcgtcttgtcgtccgatttgctccccaggtggatcagcctactccccta
acaaaagtggctgccgctggggacagcaccagctcagccacactgcactgccgtgcccgg
ggtgtccccaacatcgacttcacttggaccaaaaacggggtccctctggatctccaagac
cccaggtacacagagcacaggtaccaccagggtgttgtccacagcagcctcttgaccatc
gctaatgtgtctgcggcccaggactatgccctcttcaaatgcacggccaccaatgccctt
ggctctgaccacaccaacatccagctcgtcagcatcagccgccctgaccctccactggga
ctgaaggttgtcagcataagccctcactcggtggggctggagtggaagcctggctttgat
gggggtctgcctcagaggttccaaatcaggtacgaggccctcgagaccccaggattcctc
cacgtggatgtcctacctacacaggccactaccttcacgctgactgggctgaagccttct
acacgatataggatctggctgttggccagcaatgccctgggggacagtggattgacggac
aaggggatccaggtctccgtcactaccccaggccccgaccaggctcctgaagacacagac
caccagctgcccacagagctgcctccaggacccccaaggctgcccctgctgcctgtgctc
tttgcagttggtggtcttctgctgctctccaatgcctcctgtgttgggggtctcctctgg
cggagaagactgaggcgccttgctgaggagatctcagagaagacagaggcagggtcggag
gacaggatcaggaatgaatatgaggagagtcagtggactggggaccgggacacgagaagc
tccacggttagcacagcagaagtggacccaaattactactccatgagggacttcagcccc
cagcttcccccaacactggaggaggtgctgtatcaccaaggtgctgaaggcgaggacatg
gccttccccggacacctgcatgatgaagtggagagagcctatggcccgcctggggcctgg
ggacccctctatgatgaagtacgaatggacccctatgaccttcgctggcctgaggtccag
tgtgaggatccgaggggaatctacgaccaggtggcagcagacatggatgctgtggaagct
agctctctgccgtttgagctgaggggacatctggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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