KEGG   Rattus norvegicus (rat): 64862
Entry
64862             CDS       T01003                                 
Symbol
Map1lc3b
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
  KO
K10435  microtubule-associated protein 1 light chain
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04137  Mitophagy - animal
rno04140  Autophagy - animal
rno04216  Ferroptosis
rno04371  Apelin signaling pathway
rno04621  NOD-like receptor signaling pathway
rno05014  Amyotrophic lateral sclerosis
rno05022  Pathways of neurodegeneration - multiple diseases
rno05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    64862 (Map1lc3b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    64862 (Map1lc3b)
   04137 Mitophagy - animal
    64862 (Map1lc3b)
  09143 Cell growth and death
   04216 Ferroptosis
    64862 (Map1lc3b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    64862 (Map1lc3b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    64862 (Map1lc3b)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    64862 (Map1lc3b)
   05022 Pathways of neurodegeneration - multiple diseases
    64862 (Map1lc3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    64862 (Map1lc3b)
   03029 Mitochondrial biogenesis [BR:rno03029]
    64862 (Map1lc3b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    64862 (Map1lc3b)
Membrane trafficking [BR:rno04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    64862 (Map1lc3b)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    64862 (Map1lc3b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     64862 (Map1lc3b)
SSDB
Motif
Pfam: ATG8 APG12 Rad60-SLD
Other DBs
NCBI-GeneID: 64862
NCBI-ProteinID: NP_074058
RGD: 621315
UniProt: Q62625 A6IZP8
Structure
Position
19:66571631..66582270
AA seq 125 aa
MPSEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG
TALAV
NT seq 378 nt   +upstreamnt  +downstreamnt
atgccgtccgagaagaccttcaaacagcgccggagcttcgaacaaagagtggaagatgtc
cggctcatccgggagcagcaccccaccaagatcccagtgattatagagcgatacaagggt
gagaagcagctgcccgtcctggacaagaccaagttccttgtacctgatcacgtgaatatg
agcgaactcatcaagataattagaaggcgcctgcagctcaatgctaaccaagccttcttc
ctcctggtgaatgggcacagcatggtgagtgtgtccacacccatctctgaagtgtacgag
agcgagagagatgaagacggcttcctgtacatggtctatgcctcccaggagacgttcggg
acagcactggctgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (23)   
   RefSeq(nuc) (3)   
   GenBank (10)   
   EMBL (10)   
3D Structure (5)   
   PDB (5)   
Protein domain (3)   
   Pfam (3)   
All databases (55)   

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