KEGG   Rattus norvegicus (rat): 64865
Entry
64865             CDS       T01003                                 
Symbol
Pcdh8
Name
(RefSeq) protocadherin-8 isoform 2 precursor
  KO
K16499  protocadherin delta 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    64865 (Pcdh8)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   64865 (Pcdh8)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 64865
NCBI-ProteinID: NP_074059
RGD: 69350
Ensembl: ENSRNOG00000013101
UniProt: D3ZE55
Position
15:complement(61607521..61612090)
AA seq 972 aa
MSPVKRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQSPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSESAPVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLD
PRSGRLTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPDISITPLA
APGAPATSPFAAAAAAAALGGADAASSAGSGTQETGVTSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTKPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLVEAE
VGRSGEAVSTYVSVDPATGAIYALRSFDYETLRQLDVRVQASDGGSPQLSSNALVQVRVL
DQNDHSPVLVHPAPANGSLEVAVPGRSTKDTAVARIQARDADEGANGELAFDLLQQEPRE
AFSIGRHTGEIVLTGDLSQEPPGRVFKALLVISDGGRPPLTTTATVSFVVTAGGGSAVPA
SAGSPEHFRPPGSRLAPSGPSLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEPY
SASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKD
LINHMQSGLWACTAECKILGHSDRCWSPSCAGPNTHPPPHPPAQMSTFCKSTSLPRDPLR
RDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYESPPGGR
YVSPKKGTNENV
NT seq 2919 nt   +upstreamnt  +downstreamnt
atgagtccagtgaagcgctggggcagcccctgccttttccccttgcagctatttagtctc
tgctgggtgctctcagtggcccagagcaagacagtccgatacagcaccttcgaagaggat
gcccctggcacagtcatcgggacccttgcagaggatctgcatatgaaagtgtctggagac
acaagcttccgcctgatgaagcaattcaacagctctctgctccgggtacgcgagggggac
gggcagctgaccgtcggggatgcaggcctggaccgggagcgcctgtgtggccagtcccca
cagtgtgtgctggccttcgatgttgtcagcttctcgcaggaacagttccggcttgtgcac
gtggaggtggaggtgagggatgtaaacgaccacgcgccccgctttccccgagcccagatc
ccggtggaggtctcagagagtgctccggtaggcacgcgcatccccctggaggtgcctgta
gacgaggacgtgggtgccaatgggctgcagagtgtacgcctggccgagcctcacagcccc
ttccgagtggagctgcagacgcgcgcggacggtgcccagtgtgcggacctggtgctgcta
caggagctggaccgcgagagccaggcctcctacagcctggagctggtggctcaggacggc
gggcgaccgccgcgttccgccacagcagccctcagcgtgcgtgtgctagatgccaatgac
catagcccggccttcccgcagggtgccgtggcggaggtggaattggccgaggacgcacct
gtgggatcgctgctgctggacctggacgctgccgatcccgacgaaggtcccaacggcgac
gttgtgttcacctttggcgcccgcacccctcccgaagcccgccaccttttccggctcgac
ccacgctctggccgcctcaccttggctgggcaggtggactacgagcgccaagatacctat
gagctggacgtgcgggctcaagaccgaggcccaggaccccggacagccacctgcaaggtc
atcgtgcgcatccgagacgtcaacgacaacgctcctgatatttctatcacccctctggcc
gcccccggggctccagccacctcgcccttcgcagccgctgccgctgccgccgcacttgga
ggagcggacgcagcctcgtcggctgggtctggaacacaggaaaccggcgtcacctcgttg
gtgccagagggggcggcgcgggagagcctagtggcgctggtcagcacctcggacagggac
tctggcgccaacgggcaggtgcgctgcgccctctacgggcacgagcactttaggctacag
ccggcctatgctggcagctacctggtggtgaccgccgcatctctggaccgggagcgcatc
gcggagtacaacctgacgctggtggccgaagaccgtggcgcgccccctctgcgcactgtc
aggccctacaccgtgcgcgtgggtgacgagaatgacaacgctccactcttcaccaagcca
gtctacgaggtgtcagtccgcgaaaacaaccctccgggcgcctacctggccacagtggcc
gcccgcgaccctgacctgggccgcaacggtcaggtcacctaccggctggtagaggccgaa
gtggggcgctccggggaagccgtgtccacttacgtctcagtagacccggctaccggggcc
atctacgctctgcgtagctttgactatgagactctgcgccagcttgacgtgcgtgtccag
gccagcgacggcggttcccctcagctttccagcaatgctctggtgcaagtgcgagtgctg
gaccagaacgatcactctccggtcctcgtgcatccggcgccggccaatggctccctagaa
gtagcagtccctggacgttccaccaaggacacagctgtggcacgcatccaggcccgggat
gcagacgaaggagccaacggggaactggccttcgatctcctgcagcaggagccacgcgag
gccttctccataggccgccacacgggggagatcgtgctcaccggagacctctcgcaggag
cctcctggccgcgtgttcaaggccctactggtcatatccgacggcggccgcccccctctc
accaccacagcaaccgtcagtttcgtggtaacagccggtggtgggtcagctgtgcctgcc
agcgccgggagcccggagcacttccggccacccggctctcgcctcgcgccgtcggggcct
tcgctgcagtgggacacgccgctgatcgtcatcatcgtgttagccgggagctgcaccctg
ctgcttgcagccatcatcgccatcgccaccacctgcaaccgccgcaagaaggagccctac
agtgcctctccgggctttgggaaggagcctgcgccccctgttgcagtctggaagggccat
tcattcaacaccatctcaggccgagaagctgagaagttcagtgggaaagacagcgggaaa
ggagacagtgatttcaatgacagtgactcggacatcagcggggacgccttgaaaaaagac
ctcatcaaccacatgcagagtggactgtgggcatgcacggctgagtgcaagatcctaggc
cattctgatcgctgctggagcccatcctgtgccggacccaacacacacccgcctcctcac
ccaccagcccagatgtcaaccttctgtaagagcacgtccctgcctcgggatcctctgcgc
agggacaattactaccaggcccagctccccaagacagtggggctgcagagcgtctatgag
aaagtgctgcatagagactatgacaggacagtcactttgctctcccctccccgtccagga
aggctcccagacctgcaggagattggagtacccctctatgagtcccctcctggtggcaga
tatgtgtccccgaagaagggaaccaatgaaaatgtgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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