KEGG   Rattus norvegicus (rat): 65041
Entry
65041             CDS       T01003                                 
Symbol
Clpb
Name
(RefSeq) mitochondrial disaggregase
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04213  Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    65041 (Clpb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rno03110]
    65041 (Clpb)
Chaperones and folding catalysts [BR:rno03110]
 Heat shock proteins
  HSP100
   65041 (Clpb)
SSDB
Motif
Pfam: AAA_2 Ank_2 Ank Ank_5 Ank_3 Ank_4 ClpB_D2-small AAA_5 AAA Zeta_toxin Sigma54_activat AAA_22 AAA_24 Torsin AAA_3 nSTAND3 ABC_tran AAA_16 AAA_14 ATPase_2 YchF-GTPase_C RP853
Other DBs
NCBI-GeneID: 65041
NCBI-ProteinID: NP_075236
RGD: 621328
Ensembl: ENSRNOG00000019693
UniProt: Q9WTT2 Q6IRH7
Position
1:165440705..165563514
AA seq 677 aa
MMLSAVLRRTAPAPRLFLGLIKSPSLQSRGGAYNRSVITGDRGEPQRLRTAAWVRPGASS
VLFPGRGAATGGRRGERTEIPYLTAASSGRGPSPEETLPGQDSWNGVPNKAGLGMWALAM
ALVVQCYNKNPSNKDAALMEAARANNVQEVRRLLSEGADVNARHKLGWTALMVAAISHNE
SVVQVLLAAGADPNLGDDFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTAL
HYAVLADDYSIVKELLGGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKRE
AEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTEL
AKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAV
VLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLR
QEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLP
FCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRV
VNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAEKRPPTLRLEIIDKDSKTH
KLDIQAPLHPEKVCYTI
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgatgttgtccgcggtgttgaggagaaccgcgccagcgcctcggctcttcctagggtta
atcaaatctccatctcttcaaagccggggaggtgcttacaaccgtagcgtaatcaccgga
gaccgcggggagccgcagcggctgagaactgccgcctgggtgcgccctggagcatcttct
gtcttgttccccggacggggggcagccaccggggggcgccgtggagaacgcaccgagatc
ccatacctgactgccgcctcgtctggacgcggtcctagcccggaagaaacactcccagga
caagacagctggaatggggtccccaacaaggcgggattgggcatgtgggccttggccatg
gcgctggtggttcagtgctacaacaagaatccatctaacaaggatgcagctctgatggaa
gctgcccgagccaataatgtgcaggaagtcagaaggctgttatcagaaggtgcagatgtc
aacgcaaggcacaaacttggctggacagcattgatggtggcagccatcagccacaatgag
agtgtggtacaggttctccttgctgctggagctgacccaaaccttggggacgacttcagc
agtgtctacaagactgccaatgaacagggagtccattctttggaagtcctagtcactcga
gaggatgacttcaacaaccgactaaaccaccgtgcaagtttcaaaggctgcacagccctg
cactatgctgtcctggccgacgactacagcatcgtcaaggaactactgggtggaggagcc
aacccccttcagaggaatgagatgggacacacacccctggattatgcccgggaaggggag
gttatgaagcttctgaaaacttctgaaaccaagtacatggagaagcagaggaagcgtgag
gcagaagaacggcgccgcttcccactggagcagcgactgaaggagcacatcattggccag
gagagtgccattgctaccgttggtgctgcgatccggaggaaggagaatggctggtatgat
gaggagcaccctctagtcttcctcttcttgggatcatctggaatagggaaaactgagctg
gccaagcagacagccaagtatatgcacaaagatgccaaaaagggcttcatccggctcgac
atgtctgagttccaggagcgacatgaggtagccaagtttatcggttctccgccaggctac
atcggccatgaagaaggtggccaactgaccaagaaactgaaacagtgcccaaatgcagta
gttctctttgacgaggtggacaaggcccatccagatgtgctcaccatcatgctgcagctg
tttgatgagggccgcctgacagatggcaaggggaagaccattgactgcaaggatgccatc
ttcatcatgacttccaatgtagccagtgatgagatcgcccagcatgcattgcaactgaga
caggaagctttggagatgagccgaaatcgaatagctgaaaaccttggggatgtccagatt
agtgacaagatcaccatctcaaagaacttcaaagagaatgtgatccgacccatcctgaaa
gctcacttccggagagacgagtttctgggaaggatcaatgagattgtctacttcctccct
ttctgccactcggagctcatccagctggtcaacaaggaactgaacttctgggccaagaga
gccaagcagagacacaacatcacactactgtgggaccgcgaggtggcagacgtgttggtt
gatggctacaacgtccactatggtgcccgctccattaagcatgaggtagagcgccgtgtg
gtaaaccagctggcggcagcctatgagcaggacctgctaccagggggctgcaccctgcgt
atcactgtggaggactcagacaagcagctcctcaagagccctgagctgccctcgccccag
gctgaaaagcgtccgcctacactgcgactggagatcattgataaggacagcaagacccac
aaactggacatccaggcaccactccaccccgagaaggtgtgctacaccatctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (8)   
   GenBank (2)   
   EMBL (2)   
Protein domain (22)   
   Pfam (22)   
All databases (53)   

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