KEGG   Rattus norvegicus (rat): 65129
Entry
65129             CDS       T01003                                 
Symbol
Cldn1
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    65129 (Cldn1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    65129 (Cldn1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    65129 (Cldn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    65129 (Cldn1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    65129 (Cldn1)
   04147 Exosome [BR:rno04147]
    65129 (Cldn1)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   65129 (Cldn1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   65129 (Cldn1)
  Exosomal proteins of colorectal cancer cells
   65129 (Cldn1)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Voltage_CLC CD20 SUR7 DUF6336 TMEM174 Amastin DUF2207_C DUF4064
Other DBs
NCBI-GeneID: 65129
NCBI-ProteinID: NP_113887
RGD: 68422
Ensembl: ENSRNOG00000001926
UniProt: P56745
Position
11:87926376..87941533
AA seq 211 aa
MANAGLQLLGFILASLGWIGSIVSTALPQWKIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKVFDSLLNLNSTLQATRALMVIGILLGLIAIFVSTIGMKCMRCLEDDEVQKMWMAV
IGGIIFVISGLATLVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLSCSCPRKTTSYPTPRPYPKPTPSSGKDYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atggccaacgcggggttgcagcttctgggtttcatcctggcttcgctgggatggatcggc
tctatcgtcagcactgccctgccccaatggaagatttactcctatgctggggacaacatc
gtgactgctcaggccatctacgagggactgtggatgtcctgcgtttcgcaaagcaccggg
cagatacagtgcaaagtcttcgactccttgctgaatctgaatagtactttgcaggcaacc
agagccttgatggtaattggcatcctgctggggctgatcgcaatctttgtgtccaccatt
ggcatgaagtgcatgaggtgcttagaagatgatgaagtgcaaaagatgtggatggctgtc
atcgggggcataatatttgtaatttcaggtctggcgacattagtggccacagcatggtat
ggaaatagaattgttcaagaattctatgaccccatgacccctgtcaatgccaggtatgaa
tttggccaggctctctttactggctgggctgctgcctccctctgcctcctgggaggtgcc
ctactttcctgctcctgtccccggaaaacaacctcttacccaacaccacggccttatccc
aagccaacaccttctagtgggaaagactacgtgtga

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