KEGG   Rattus norvegicus (rat): 65131
Entry
65131             CDS       T01003                                 
Symbol
Cldn5
Name
(RefSeq) claudin-5
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    65131 (Cldn5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    65131 (Cldn5)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    65131 (Cldn5)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    65131 (Cldn5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    65131 (Cldn5)
   04147 Exosome [BR:rno04147]
    65131 (Cldn5)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   65131 (Cldn5)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   65131 (Cldn5)
  Exosomal proteins of colorectal cancer cells
   65131 (Cldn5)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like
Other DBs
NCBI-GeneID: 65131
NCBI-ProteinID: NP_113889
RGD: 68431
Ensembl: ENSRNOG00000050071
UniProt: Q9JKD6 A6JSE9
Position
11:complement(95717172..95718598)
AA seq 218 aa
MGSAALEILGLVLCLVGWVGLILACGLPMWQVTAFLDHNIVTAQTTWKGLWMSCVVQSTG
HMQCKVYESVLALSAEVQAARALTVGAVLLALVALFVTLTGAQCTTCVAPGPVKARVALT
GGALYALCGLLALVPLCWFANIVVREFYDPTVPVSQKYELGAALYIGWAASALLMCGGGL
VCCGAWVCTGRPEFSFPVKYSAPRRTTANGDYDKKNYV
NT seq 657 nt   +upstreamnt  +downstreamnt
atggggtctgcagcgttggaaattctgggtctggtgctgtgtctggtaggctgggtgggc
ttgatcctggcgtgtgggctgcccatgtggcaggtgactgccttcctggaccacaatatc
gtgacggcgcagacgacttggaaggggctgtggatgtcgtgcgtggtgcagagcaccggg
cacatgcaatgcaaagtgtatgagtctgtgctggcgctgagcgcggaggtgcaggcagct
cgggcactcaccgtgggcgctgtgctgctggcgcttgtggcactctttgttaccttgacc
ggcgctcagtgcaccacctgcgtggccccgggcccagttaaggcacgggtggcactcacg
ggaggagcgctttatgccctgtgtgggcttctggcactggtgccactctgctggttcgcc
aacatcgtagtccgggagttctatgatccaacggtgccggtgtctcagaagtacgagctg
ggcgcggcgctgtacatcggctgggcggcctccgcactgctcatgtgtggcggcggcctc
gtgtgctgtggcgcctgggtttgcaccgggcgtccagagttcagttttccagtcaagtac
tcagcaccaaggcgaaccacggccaacggcgattacgacaagaagaactacgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (23)   
   RefSeq(nuc) (1)   
   GenBank (11)   
   EMBL (11)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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