KEGG   Rattus norvegicus (rat): 65134
Entry
65134             CDS       T01003                                 
Symbol
Stx5
Name
(RefSeq) syntaxin-5
  KO
K08490  syntaxin 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    65134 (Stx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    65134 (Stx5)
Membrane trafficking [BR:rno04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    65134 (Stx5)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Syntaxin Apolipoprotein DUF16 SKA1 MCPsignal Vac_Fusion DUF5063 DUF1664 DUF5082
Other DBs
NCBI-GeneID: 65134
NCBI-ProteinID: NP_113892
RGD: 68426
Ensembl: ENSRNOG00000018847
UniProt: Q08851 A6HZT3
Position
1:215066532..215082685
AA seq 355 aa
MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAINSSSDIAPLPTPVALVPSPPDTMSCRDR
TQEFLSACKSLQSRQNGIQTNKPALHATRQCSEFTLMARRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVRAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRNRREQFSRAPVSALPLAPNNLGGGPIVLGGESRAS
RDVAIDMMDPRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgatcccgcggaaacgctacggatctaagaacacggatcagggtgtctacctgggtctc
tcaaagacacaggttctgtcccctgcaactgctatcaatagcagcagtgacatcgctcct
ttgcccaccccggtggccctggtcccctcccctcccgacactatgtcctgccgggatcgg
acccaggagttcctgtctgcctgcaagtcgctgcagagccgtcagaatggaatccaaaca
aataaaccagctctgcacgctacccggcagtgcagcgagtttaccctcatggccaggcgc
attgggaaagatctcagcaatacatttgccaagctggagaagctaacaatcctggcaaag
cgcaagtccctctttgatgataaagcagtagaaattgaggaactaacatacatcatcaaa
caggacatcaatagcctcaacaaacaaattgctcagcttcaagattttgtgagggccaag
ggcagccagagtggccggcatctgcagacccattccaacaccattgtagtttcattgcag
tcaaaactggcttccatgtccaatgacttcaagtctgttttggaagtgaggactgaaaat
ctgaaacagcagaggaaccgtcgggaacagttctccagggcgccagtgtcggcactgcct
ctggcccccaacaaccttggaggtggtcccatagttctgggaggagagtcccgagcctcc
agggacgtggccatcgacatgatggaccctagaacaagccagcagcttcagctcattgat
gagcaggattcctacatccagagtcgggcagacaccatgcagaacattgagtctacaatt
gttgagctgggctccatttttcaacaattggcacacatggttaaagaacaggaggaaaca
attcagaggattgacgagaatgtgcttggagcccagctggatgttgaggccgcccattca
gagatcctcaagtacttccagtcagtcacctccaatcggtggctcatggtcaaaatcttc
ctcatcctcattgtcttcttcatcatctttgtggtcttccttgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (11)   
   Pfam (11)   
All databases (38)   

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