KEGG   Rattus norvegicus (rat): 65172
Entry
65172             CDS       T01003                                 
Symbol
Limk1
Name
(RefSeq) LIM domain kinase 1
  KO
K05743  LIM domain kinase 1 [EC:2.7.11.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
rno04666  Fc gamma R-mediated phagocytosis
rno04810  Regulation of actin cytoskeleton
rno05135  Yersinia infection
rno05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    65172 (Limk1)
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    65172 (Limk1)
  09158 Development and regeneration
   04360 Axon guidance
    65172 (Limk1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    65172 (Limk1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    65172 (Limk1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rno01001]
    65172 (Limk1)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     65172 (Limk1)
Protein kinases [BR:rno01001]
 Serine/threonine kinases: TKL group
  LISK family [OT]
   65172 (Limk1)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase LIM PDZ Kdo PDZ_6 ABC1 RIO1 Haspin_kinase PDZ_2 Pkinase_fungal PknG_TPR APH
Other DBs
NCBI-GeneID: 65172
NCBI-ProteinID: NP_113915
RGD: 62055
Ensembl: ENSRNOG00000001470
UniProt: A6J0H7 G3V663
Position
12:27663177..27697085
AA seq 647 aa
MRLTLLCCTWREERMGEEGSELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLS
HQYYEKDGQLFCKKDYWARYGESCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGD
GDTYTLVEHSKLYCGQCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASAHGKRGLSV
SIDPPHGPPGCGTEHSHTVRVQGVDPGCMSPDVKNSIHIGDRILEINGTPIRNVPLDEID
LLIQETSRLLQLTLEHDPHDSLGHGPVSDPSPLASPVHTPSGQAGSSARQKPVLRSCSID
TSPGAGSLVSPASQRKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRE
TGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT
LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENRNVVVADFG
LARLMIDEKGQSEDLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLC
EIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL
EQWLETLRMHLAGHLPLGPQLEQLERGFWETYRRGESSLPAHPEVPD
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgaggttgacgctactttgttgcacctggagggaagaacgtatgggagaggaaggaagc
gagttgcctgtgtgtgcgagctgtagccagagtatctatgacggccagtacctccaggcc
ctgaatgctgactggcatgcggattgcttcaggtgctgcgagtgtagcacctccctttca
caccagtactacgagaaggatggacagctcttctgcaagaaggactactgggcccgctat
ggcgagtcttgccacgggtgctccgaacacatcaccaaagggctggtcatggtggccggg
gagctgaagtatcaccccgagtgcttcatctgccttgcctgtggaaacttcatcggtgat
ggggacacctacacactggtggagcactccaagctgtactgcgggcagtgctactaccag
actgtggtaactccagtcatcgaacagatcctccctgactcacccggctcccacctgccc
cacacagtcaccctcgtgtctatcccagcctctgctcatggcaaacgaggcctgtctgtc
tccatcgacccccctcacggcccaccaggatgtggcacggagcattcgcacacggtccga
gtccaaggagtggacccgggctgcatgagcccggatgtgaagaattccatccacatcgga
gacaggatcttggaaatcaacggcacgcccatccggaatgtgccgctggacgagatcgac
ttgctgatccaggagaccagccgcctgctccagctgaccctcgagcacgacccccatgac
tcactgggccatgggccagtgtcggatcccagccccctggcctccccggtacacactccc
agcggacaggcaggcagctctgcccggcagaaacctgtcttgaggagctgcagtattgac
acgtccccgggtgccggctcactagtctcaccagcctcccagcgcaaggacctgggtcgc
tccgaatccctccgagtggtttgtcgaccacaccgcatcttccggccgtctgacctcatc
catggggaggtgttgggcaagggctgtttcggccaggccatcaaggtgacacatcgagaa
acgggcgaggtgatggtgatgaaggaactcatccggtttgacgaggagacccagaggaca
ttcctcaaggaggtgaaggtcatgcgatgcctggagcaccctaacgtgctcaagttcatc
ggcgtgctgtacaaggacaagcggctgaacttcatcaccgagtacatcaagggcggcacc
ctgcggggcatcatcaagagcatggacagccagtacccgtggagtcagagggtcagcttt
gccaaggacattgcatcagggatggcctacctccattcgatgaacatcatccaccgagac
ctcaactcccacaactgtctggtccgtgagaacaggaacgtggtggtggctgactttggg
ctggctcgactcatgatcgatgagaagggtcagtctgaagacttgcgtagccttaagaag
ccggaccgcaagaaacggtacacagtggtgggtaacccctactggatggcgccagagatg
atcaatggtcgtagttacgatgaaaaggtggacgtgttttcctttggaattgtcctttgt
gagattatcgggcgtgtgaatgcagaccctgactatctgccccgcactatggactttggc
ctcaatgtaaggggtttcctggaccgctactgtccaccaaactgtcccccaagtttcttc
cccatcactgtgcgctgctgtgacctggatcctgagaagaggccctcttttgtaaagctg
gaacaatggctagaaacacttcgcatgcacttggctggtcacctgccactgggcccacaa
ctggaacaactggagcggggcttctgggagacctaccggcggggcgagagctcgctaccc
gcccaccccgaggtccctgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (13)   
   Pfam (13)   
All databases (49)   

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