KEGG   Rattus norvegicus (rat): 65201
Entry
65201             CDS       T01003                                 
Symbol
Clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform 1
  KO
K10421  CAP-Gly domain-containing linker protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    65201 (Clip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    65201 (Clip1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    65201 (Clip1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     65201 (Clip1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     65201 (Clip1)
SSDB
Motif
Pfam: CAP_GLY CLIP1_ZNF Fungal_TACC
Other DBs
NCBI-GeneID: 65201
NCBI-ProteinID: NP_113933
RGD: 67404
Ensembl: ENSRNOG00000001247
UniProt: Q9JK25
Position
12:38571533..38678779
AA seq 1320 aa
MSMLKPSGLKAPTKILKPGSTALKTPAAAAAPLEKTVPSEKASGPPSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLKGIFTR
PSKLTRKVQAEDEANGLQTAHARAASPLSTAAATMVSSSPATPSNIPQKPSQPVAKETSA
TPQISNLTKTASESISNLSEAGSVKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGEW
CGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMA
TTPASLKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEKQ
QHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAAD
REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAD
KLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESSKPPGDVDMSLSLLQEI
SALQEKLEVTHTDHQNEVTSLKDHFGTREEMFQKEIKALHAATEKLSKENESLRSKLDHA
NKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGIGTDSAEFAELKTQIERLRLDYQH
EIESLQSKQDSERSAHAKEMESMKAKLMKIIKEKEDSLEAVKARLDTAEDQHLVEMEEML
SKLQEAEIKKEKFASASEEAVSTQTSMQDTVNKLHQKEEQFNMLSSELEKLRENLTDMEA
KFKEKDEREDQLVKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERSVEELQLKLTK
ANENASLLQKSIGEVTLKAEQSQQEAAKKHEEEKKELENKLLELEKKMETSHYQCQDLKA
KYEKASSETKIKHEEILQNFQKMLVDTEDKLKAAQEANRDLMQDMEELKSQADKAKAAQT
AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQSELDTLKENNLKTVEELNKSKELLNEE
NQKMEEFKKEIETLKQAAAQKSQQLSALQEENVKLAEELGRTRDEVTSHQKLEEERSVLN
NQLLEMKKSLPSNTLRESEYRKDADEEKASLQKSISLTSALLTEKDAELEKLRNEVTVLR
GENASAKSLHSVVQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDVQTEEDERAQE
SQQMIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGEDPNSYDSDDQEKQSKKKPRLF
CDICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCEICEMFGHWATNCNDDETF
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgagtatgctgaaacccagcgggctgaaggccccgaccaagatcctaaagcctgggagc
acagccttgaagacccctgctgctgctgcagctccattggagaagacagtacccagtgaa
aaagcctcaggccctccatcctctgagacccaagaggagtttgtggacgacttccgagtt
ggagaacgtgtttgggtgaacgggaataaacctggatttatccagtttcttggggaaact
cagtttgcaccaggccagtgggctggtattgttttggatgaacccataggaaagaacgac
ggctcagtggcaggagtgcggtatttccagtgtgagcctttaaagggcatcttcacccga
ccgtcaaagctaacgaggaaggtacaagcagaggatgaagccaacggcctgcagacagct
cacgcgagagctgcttcacctctgtccactgctgcagccaccatggtgtcctcttctcca
gccactccctcaaatattccccagaaaccgtcccagccagtggcaaaagaaacttcagcg
acacctcaaattagcaaccttacgaaaaccgccagcgagtcaatctccaacctttcagag
gctggctctgtcaagaagggagagcgagagctcaagatcggagacagggtgctggtcggt
ggcacgaaggctggcgtggtccggtttcttggagagactgacttcgccaagggggagtgg
tgtggtgtggaattggacgaacctttggggaagaacgacggtgctgttgctggaacaagg
tattttcaatgtcaacccaagtacggattgttcgctcccgtccacaaagtgacaaagatt
ggcttcccttctaccaccccagccaaagccaaagccgctgctgtgaggcgagtgatggcc
accacgcccgccagcctgaagcgaagcccttctgcctcctccctcagctccatgagctct
gtggcctcctctgtgagcagcaagcccagccggacaggactattgactgaaacctcttcc
cgctacgcccgcaagatctcgggcaccactgccctccaggaggcgctgaaggagaagcag
cagcacattgagcagctgctggctgagcgggacctggagcgggccgaggtggccaaggct
accagccacgtgggggaaatagagcaggagctagccctggcccgagatgggcatgaccag
catgtcctggaactggaggccaagatggaccagctgcgtaccatggtagaagctgctgac
agggagaaagtggagctcctcaaccagctggaagaggagaaaaggaaggttgaggacctt
cagttccgagttgaagaagaatcaattaccaaaggtgatcttgagacgcagaccaaactg
gagcatgcccgcattaaggagcttgaacagagcctgctctttgaaaagaccaaagctgac
aaactccagagggagttagaagacactagggtggctacagtatcagaaaagtcccgaata
atggaactagaaaaggacctagcgttgagagtacaggaagtagctgagctccgaagaagg
ctagagtccagtaaacctcccggagatgtggatatgtctctttctcttttgcaagaaatc
agtgctttgcaagaaaagctagaagtcacacatactgaccaccagaacgaggtgacgtct
ctgaaggaccactttggaactcgggaagagatgtttcagaaggagatcaaggctctgcac
gctgccactgaaaagctctccaaagagaacgagtccttgaggagcaagcttgaccatgcc
aacaaggagaactcagacgtcatcgctctgtggaagtccaaactggagaccgccatcgcg
tcccaccagcaggcaatggaggagctgaaggtgtcctttagcaaagggattggaactgac
tcggctgagtttgctgagttaaagacacagatagagagactcagactagattaccagcac
gaaatagaaagtttacagagtaagcaggactccgaacggtctgcccatgctaaagagatg
gagtccatgaaggccaagctgatgaagatcatcaaagagaaggaggacagcctggaggcc
gtcaaagcacggctggacacggcggaagaccagcacctggtggagatggaggagatgctc
agcaagctgcaggaggcagagattaagaaagaaaagtttgccagcgcttcagaggaggcc
gtctctactcagacaagtatgcaagatactgttaataaactgcaccaaaaggaggaacag
tttaatatgttgtcttctgaactggagaagctgagagaaaatttaacagacatggaggca
aaatttaaagagaaggatgaacgggaagatcagctggtaaaggcaaaggaaaagttagaa
aatgacattgcagaaataatgaagatgtcaggggacaactcttctcagctgacaaagatg
aatgacgaattacgtctgaaggaaaggtctgtggaagaactacaactcaaacttacaaag
gctaatgaaaatgcaagtcttctgcagaaaagtatcggggaagtaactcttaaagctgaa
cagagtcaacaggaagcagccaaaaaacatgaagaggaaaagaaagaactggagaacaaa
ttgttggaactggaaaagaagatggaaactagccactaccagtgtcaggacctgaaagcc
aagtatgaaaaagccagttctgagactaaaataaagcacgaagaaatcctgcaaaacttc
cagaagatgctggtggacacggaggataaactgaaggctgcccaggaggccaacagagac
ctgatgcaggacatggaggagctgaaatcccaggccgacaaagccaaagctgctcagact
gcagaagacgccatgcagatcatggaacagatgaccaaagagaaaacagaaacactggcc
tccttggaggacaccaagcaaacgaatgcaaaactacagagcgaattggacacacttaag
gaaaacaacttgaaaactgtggaagagctgaacaagtcaaaagaacttctgaacgaagag
aaccaaaaaatggaagaattcaagaaggaaatagaaaccctaaagcaggcagcagctcag
aagtcccagcagctttcagcactgcaggaagagaacgtcaaacttgccgaggagctgggg
aggacgcgggacgaagtcacaagtcatcaaaagctggaagaagaacgatctgtactcaat
aatcagttgttagaaatgaaaaagagcttacccagtaacaccttaagagaatccgagtac
agaaaagacgccgatgaagagaaagcctccttgcagaaatccatcagcctcaccagtgcc
ttactcacggagaaggacgcagagctggagaagctgaggaatgaggtcacagtgctcagg
ggggaaaacgcctctgccaagtccctgcactcagtcgtgcagaccctggagtcggataag
gtgaagcttgagctcaaggtcaaaaacctggaacttcaactcaaggaaaacaagaggcag
ctcagcagctcctcaggtaacactgatgttcagacagaagaggatgagagagcccaggag
agtcagcaaatgattgatttcctcaactcggtaatagtggaccttcaaagaaagaaccaa
gacctcaagatgaaggtggagatgatgtctgaagctgcgctgaacggcaacggggaggat
ccgaacagttacgacagtgatgaccaggagaagcagtccaagaagaaaccccgcctcttc
tgtgacatttgtgactgctttgatctccacgacacagaggactgccccacccaggcgcag
atgtcagaagaccctccgcactccactcaccacggcagccggagcgaggagcggccatac
tgtgagatctgtgagatgtttggccactgggccaccaactgcaacgacgatgagaccttc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (38)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (36)   
DNA sequence (42)   
   RefSeq(nuc) (36)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (94)   

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