KEGG   Rattus norvegicus (rat): 652955
Entry
652955            CDS       T01003                                 
Symbol
Rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 precursor
  KO
K15701  E3 ubiquitin-protein ligase RNF130 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    652955 (Rnf130)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     652955 (Rnf130)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    652955 (Rnf130)
SSDB
Motif
Pfam: zf-RING_2 PA zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 PspB zf-RING_16 Prok-RING_4 Vps39_2 zinc_ribbon_16
Other DBs
NCBI-GeneID: 652955
NCBI-ProteinID: NP_001032747
RGD: 1562041
Ensembl: ENSRNOG00000046330
UniProt: Q6Y290
Position
10:34843920..34957130
AA seq 419 aa
MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPGRGTPLTFRIDRGR
YGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKIS
RAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIA
VGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKK
AISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCT
CPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRSALGDLANDSSLGLEPLRTS
GISPLPQDGELTPRTGEINIAVTKEWFIIASFGLLSALTLCYMIIRATASLNANEVEWF
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgagcggcgcggcgcgggcgggcccggcccggctcgcggcgctggccctgctgacctgc
agcctgtggccgacgcgagcggacaacgcgagccaggagtactacacggcgctcatcaac
gtgacggtgcaggagcccggccgcggcacccctctcacgttccgcatcgaccgcgggcgc
tacgggctcgactcacccaaggccgaggtccgcggccaggtgctggcaccgctgcccatc
cacggagttgctgatcatctgggctgtgatcctcaaacacggttctttgtccctcctaat
atcaaacagtggatcgccttgctccaaagaggaaattgcacctttaaagaaaaaatatca
cgggctgcttttcacaatgcggttgctgtagtcatctacaataataaatccaaagaggag
ccagtcaccatgactcatccaggcacgggagatattattgctgtcatgataacagaattg
aggggtaaggatattttgagttatctggagaaaaacatctctgtacaaatgacaatagct
gttggaactcgaatgccgccaaagaacttcagccgtggctctctagtcttcgtgtcaata
tcctttattgttttgatgattatttcttcagcgtggctcatattctacttcattcagaag
atcaggtatacaaatgctcgcgacaggaaccagcgtcgtcttggagacgcagccaagaaa
gccatcagtaaattgacaactagaacggtgaaaaagggcgataaggaaacagacccagac
ttcgatcactgtgcagtctgcatagagagctataagcagaatgatgttgttcgggttctc
ccctgcaagcatgttttccacaaatcctgtgtggatccctggctcagtgaacactgtacc
tgccctatgtgtaaacttaatattttgaaagccctaggaattgtgccaaatctgccatgt
actgataatgtagcgtttgatatggaaaggctcaccagaacccaggcagttaaccgaaga
tcagcccttggtgaccttgccaatgacagttcccttggccttgagccactgagaacttct
gggatatcgcctcttcctcaagatggggagctcactcctcgaacgggtgaaatcaacatt
gcagtaacaaaagaatggtttattattgccagttttggcctcctcagtgctctcacactc
tgctacatgatcatcagagccacagctagcttgaatgctaatgaggtagaatggttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (15)   
   Pfam (15)   
All databases (42)   

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