KEGG   Rattus norvegicus (rat): 66019
Entry
66019             CDS       T01003                                 
Symbol
Cdx2
Name
(RefSeq) homeobox protein CDX-2
  KO
K22234  homeobox protein CDX2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09162 Cancer: specific types
   05226 Gastric cancer
    66019 (Cdx2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    66019 (Cdx2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    66019 (Cdx2)
SSDB
Motif
Pfam: Caudal_act Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 66019
NCBI-ProteinID: NP_076453
RGD: 621234
Ensembl: ENSRNOG00000032759
UniProt: A0A9K3Y7D3 Q9ESV7
Position
12:12762769..12769246
AA seq 310 aa
MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDSAQS
PGPSWPTAYGAPLREDWNGYAPGGAAAANAVAHGLNGGSPAAAMGYSSPAEYHAHHHPHH
HPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLSPSGQRRNLCEWMRKPAQPSLGSQV
KTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKE
RKINKKKLQQQQQQQPPAPPPPQPSQPQSGALRSVPEPLSPVTSLQGSVPGSVPGVLGPA
GGVLNSTVTQ
NT seq 933 nt   +upstreamnt  +downstreamnt
atgtacgtgagctaccttctggacaaggacgtgagcatgtaccctagctccgtgcgccac
tccggcggcctcaacctggcgccgcagaactttgtcagtcccccgcagtacccggactac
ggtggttaccacgtggcggccgccgctgctgcggcggcgaacttggatagcgctcagtcc
ccagggccatcctggcccaccgcgtacggcgcccctctccgcgaggactggaatggctac
gcacccgggggcgctgccgcagccaacgcggtagcccacggcctcaatggtggctccccg
gccgccgctatgggctacagcagccccgccgaataccacgcacaccatcacccgcatcat
caccctcaccatccggccgctgcgccgtcctgcgcctccggattgctgcagacgctcaac
cccggccctccagggcccgcagccaccgccgccgcagaacagctgtcccccagcggccag
cggcgaaacctttgtgaatggatgaggaagccagctcagccgtccctaggaagccaagtg
aaaaccaggacgaaagacaaataccgggtggtgtacacagaccatcagcggctggagctg
gagaaggaatttcactatagtcgatacatcaccatcaggaggaaagctgagttggccgcc
acactcgggctctcggagaggcaggttaaaatttggtttcagaaccgcagagccaaggaa
aggaaaatcaacaaaaagaagttgcaacagcagcagcagcagcagcctcccgcaccgccg
ccaccacagccttcccagcctcagtccggtgcattgcggagcgtgccggagcccttgagt
cctgtgacctccttgcaaggctcggtgcctggttctgttcctggggttctggggccagct
ggaggggttttaaactccactgtcacccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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