KEGG   Rattus norvegicus (rat): 679668
Entry
679668            CDS       T01003                                 
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1 precursor
  KO
K16665  leucine-rich repeat transmembrane neuronal protein 1/2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    679668 (LRRTM1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 LRR_9 UL97 HemY_N LRR_12
Other DBs
NCBI-GeneID: 679668
NCBI-ProteinID: NP_001382551
RGD: 1585921
Ensembl: ENSRNOG00000006093
Position
4:111246213..111295638
AA seq 523 aa
MDFLLLGLCLHWLLRRPSGVVLCLLGACFQMLPAAPSGCPGQCRCEGRLLYCEALNLTEA
PHNLSGLLGLSLRYNSLSELRAGQFTGLMQLTWLYLDHNHICSVQGDAFQKLRRVKELTL
SSNQITELANTTFRPMPNLRSVDLSYNKLQALAPDLFHGLRKLTTLHMRANAIQFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLIKVNFAHFPRLISLNSLCL
RRNKVAIVVSSLDWVWNLEKMDLSGNEIEYMEPHVFETVPYLQSLQLDSNRLTYIEPRIL
NSWKSLTSITLAGNLWDCGRNVCALASWLSNFQGRYDANLQCASPEYAQGEDVLDAVYAF
HLCEDGAEPTSGHLLSAAVTNRSDLAPPESSATTLVDGGEGLHDSTLEPITVAIPGGEHA
ENAVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPASLRQLRQCFVTQRRKQKQKQTMHQ
MAAMSAQEYYVDYKPNHIEGALVIINEYGSCTCHQQPARECEV
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggatttcctgctactcggcctctgtctacactggctgctgaggaggccctcgggggtg
gtcttgtgtctgctgggggcctgctttcagatgctgcccgccgcccccagcggatgcccg
gggcagtgtcggtgcgaggggcggctgctgtactgcgaggcgctcaacctgaccgaggcg
ccccacaacctgtccggcctgctgggcttgtctttgcgctacaacagcctctcggagctg
cgcgctggccagttcacagggttaatgcagctcacgtggctgtatttggatcacaatcac
atctgctcggtgcagggggacgcctttcagaaactgcgccgagttaaggaactcacactg
agttccaaccagatcaccgaactggccaacaccacctttcggcccatgcccaacctgcgc
agcgtggacctgtcctacaacaagctgcaggcgctagctccggatctcttccacgggctg
cggaagctcaccaccctgcacatgcgggccaatgccattcaattcgtgccggtgcgcatc
tttcaggactgccgcagcctcaagtttctcgacattggatacaatcagctcaagagtctg
gcgcgcaactctttcgccggcttgttcaagctcacagagctacacctggagcataacgac
ttgatcaaggtgaacttcgcccatttcccgcgcctcatctccctgaactcgctctgcctg
aggcggaataaggttgccattgtggtcagctctcttgactgggtttggaatttggagaaa
atggacttgtctgggaacgagatcgaatacatggagccccatgtgttcgagaccgtgccg
tacctgcagtccctacagctggactccaaccgcctcacctacattgagccccgtatcctc
aactcctggaagtcccttacgagcatcactctagccgggaacctgtgggactgcgggcgc
aacgtgtgtgccctggcttcctggctcagcaacttccagggacgttacgatgctaacttg
cagtgcgccagcccggagtacgcacagggcgaggacgtcttggatgcagtttatgctttc
cacttgtgtgaggatggggccgagcccaccagcggccacctcctgtcggcggccgtcact
aaccgcagtgacctagcgccccctgagagctcagccacgactctggtggacggtggggag
gggctgcacgatagcacgcttgaacccatcaccgtggctatccccggcggtgagcacgca
gagaacgcagtgcaaatccacaaggtggtcacgggcacgatggccctcatcttctccttc
ctcatcgtggtcctcgtactttatgtatcctggaagtgtttcccagccagcctcaggcag
ctcagacagtgctttgtcacgcagcgcaggaagcagaagcagaaacagaccatgcatcag
atggctgctatgtctgcccaggaatattatgttgattacaaacccaaccacatcgagggg
gccctggttatcatcaacgagtacggctcgtgtacctgtcaccagcagcctgcgagggaa
tgtgaggtgtga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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