KEGG   Rattus norvegicus (rat): 679693
Entry
679693            CDS       T01003                                 
Symbol
Med12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform 2
  KO
K15162  mediator of RNA polymerase II transcription subunit 12
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04919  Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    679693 (Med12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    679693 (Med12)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    CDK-module
     679693 (Med12)
SSDB
Motif
Pfam: Med12-LCEWAV Med12-PQL Med12
Other DBs
NCBI-GeneID: 679693
NCBI-ProteinID: NP_001180221
RGD: 1585896
Ensembl: ENSRNOG00000003848
Vega: OTTRNOG00000000602
Position
X:70444615..70467780
AA seq 2187 aa
MAAFGILSYEHRPLKRLRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPAKISSNFSSIIAEKLRCNTLSDTGRRKSLMNQKDNFWLVTARSQSAINTWFTDL
AGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAMSETKVKKKNT
ADPFTEWTQIITKYLWEQLQKMAEYYRPGPAGSGVCGSAIGPLPHDVEMAIRQWDYNEKL
ALFMFQDGMLDRHEFLTWVLECFEKIRPGEDELLKLLLPLLLRYSGEFVQSAYLSRRLAY
FCTRRLALQLDGVNSHSSHVISAQSTSSLPTTPAPQPPTSNTPSTPFSDLLMCPQHRPLV
FGLSCILQTILLCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPEGNSAFTQQVRA
KLREIEQQIKERGQAVEVRWSFDKCQEATAGFTIGRVLHTLEVLDSHSFERSDFSNSLDS
LCNRIFGLGPSKDGHEISSDDDAVVSLLCEWAVSCKRSGRHRAMVVAKLLEKRQAEIEAE
RCGESEAADEKGSVASGSLSAPSAPIFQDVLLQFLDTQAPMLTDPRSESERVEFFNLVLL
FCELIRHDVFSHNMYTCTLISRGDLAFGTPGPRPPSPFDDPADDPERKEAEGSSSSKLED
PGLSESMDIDPSSSVLFEDMEKPDFSLFSPTMPCEGKGSPSPEKPDVEKDVKPPPKEKIE
GTLGILYDQPRHVQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHAIKKITKDIL
KVLNRKGTAETDQLAPIVPLNPGDLTFLGGEDGQKRRRNRPEAFPTAEDIFAKFQHLSHY
DQHQVTAQVSRNVLEQITSFALGMSYHLPLVQHVQFVFDLMEYSLSISGLIDFAIQLLNE
LSVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHACLILNQDQMAQVFEGLCGVVKHGM
NRSDGSSAERCILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSESNMRWAP
EFMIDTLENPAAHTFTYTGLGKSLSENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCA
ELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQ
CLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQSDGNKPTVGI
RSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFTVPGGTEELPEEEGGGGSS
GRRQGGRNISVETASLDVYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSAQAQR
LMQLICYPHRLLDSEDGENPQRQRIKRILKNLDQWTMRQSSLELQLMIKQTPNTEMNSLL
ENIAKATIEVFQQSAETGSSSGSTASNMPSSSKAKPVLSSLERSGVWLVAPLIAKLPTSV
QGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGL
LASLHSQVHQIVINWRENQYLDDCKPKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAQ
LLLEIIISGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKK
LQKDLGERQSDSLEKVHQLLPLPKQNRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQV
STKQKISPWELFEGLKPSTAPLSWAWFGTVRVDRRVARGEEQQRLLLYHTHLRPRPRAYY
LEPLPLPPEDEEPPAPALLEPEKKAPEPPKTDKPGTAPPSTEERKKKSTKGKKRSQPATK
SEDYGMGPGRSGPYGVTVPPDLLHHANPGSISHLSYRQSSMGLYTQNQPLPAGGPRVDPY
RPVRLPMQKLPTRPTYPGVLPTTMTTVMGLEPSSYKTSVYRQQQPTVPQGQRLRQQLQQS
QGMLGQSSVHQMTPSSSYGLQSSQGYTSYVSHVGLQQHTGPAGTMVPPSYSSQPYQSTHP
STNPTLVDPTRHLQQRPSGYVHQQAPTYGHGLTSTQRFSHQTLQQTPMMGTMTPLSAQGV
QAGVRSTSILPEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQQILRQQ
QQQQQQQQQQQQQQQQQQQQQPQQQQPHQQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQ
TAALVRQLQQQLSNTQPQPSTNIFGRY
NT seq 6564 nt   +upstreamnt  +downstreamnt
atggcggctttcgggatcttgagctatgaacaccgacccctgaagcggctgcggctgggg
cctcccgatgtgtaccctcaagatcccaaacagaaggaggatgaactgacggctttgaat
gtaaaacaaggtttcaataaccagcctgctgtctctggggatgaacatggcagtgccaag
aacgtcaacttcaatcctgccaagatcagttccaacttcagcagcatcatcgcagagaag
ttaaggtgtaatactctctctgacactggtcgaaggaagtccctaatgaaccagaaggac
aacttctggctggtgactgcaagatctcagagtgctattaacacctggttcactgaccta
gctggcaccaaaccactcacacacctagccaaaaaggtccccattttcagtaagaaggaa
gaagtatttgggtacttggccaaatacacagtgcctgtgatgcgggctgcttggctcatt
aagatgacctgcgcctactatgcagcaatgtctgagactaaggttaagaagaaaaacacc
gctgaccccttcactgaatggactcaaatcatcacaaagtacttatgggagcagctacag
aagatggctgaatactatcggccagggcctgcaggaagtggagtctgtggttctgctata
ggacctttgccccatgatgtagagatggcaatcaggcagtgggactacaatgagaagctc
gccctcttcatgtttcaggatggaatgctggacagacatgagttcctgacttgggtgctt
gagtgttttgagaaaatacgccctggagaagatgaattgcttaaattgctgcttccccta
ctgcttcgatactcaggggagttcgttcagtctgcctatctgtcccgccgccttgcctac
ttctgtacccggagattggctctacagctggatggtgtgaacagccactcatctcacgtt
atatcggctcagtcaacgagttctctgcccactaccccagcacctcaacccccaactagc
aatacaccctcgactccctttagtgacctgcttatgtgccctcagcaccgtcccttggtt
tttggcctcagctgtatccttcagaccatcctcctgtgttgccctagtgccctagtttgg
cactactcattgactgatagccgaattaagactggctcaccacttgaccacctgcctatt
gctccttccaacttgcctatgccagagggtaacagtgcctttactcagcaggtccgtgca
aaattacgagagatcgaacaacagatcaaggagcgtggacaagcagttgaggttcgctgg
tcctttgataagtgccaggaagctactgcaggcttcaccattggacgggtgcttcatact
ttagaagtgctggacagccatagttttgagcgctctgactttagtaactctcttgactcc
ctttgtaatcgaatctttggactggggcctagtaaggatggtcatgagatctcctctgat
gatgatgctgtggtgtcgttattgtgtgaatgggctgtaagctgtaagcgctccgggcgg
caccgtgctatggtagtagccaaactcctggagaagagacaagcagaaattgaggctgag
cgctgtggagaatctgaagcagctgatgagaagggttccgtcgcctctggttccctttct
gctcctagtgcacccattttccaggatgtcctcctgcagtttctggatacacaggctccc
atgctgactgatccccgaagtgagagtgagcgagtggaattctttaacttggtactgctg
ttctgtgaactgatccgacatgatgtcttctcccataatatgtacacctgcactctcatc
tctcggggagaccttgcatttggaacacctggtcctcggcccccctctccttttgatgat
cctgcagatgatcccgagcgcaaggaggctgaaggcagcagcagcagcaagctagaggat
ccagggctctctgaatctatggacatcgaccctagttccagtgtgctttttgaggacatg
gaaaagcctgatttctcattgttctcccctactatgccttgtgaggggaagggaagccca
tcccctgagaagccagatgtcgaaaaggatgtgaaacccccacccaaagagaagattgag
gggacacttgggattctgtatgaccagccacgacatgtgcagtatgccacacactttcca
atcccacaggaggagtcatgcagccatgagtgcaaccagcggttggtcgtactgtttggg
gtggggaagcagcgagatgatgcccgccatgccatcaagaagattaccaaggatatcctg
aaggttctgaaccgcaaggggacagcagaaactgaccagcttgctcctattgtgcctctg
aatcctggagacctgacattcttaggtggggaagatgggcagaagcgacgccgcaaccgg
cctgaagccttccccactgctgaagatatttttgctaagttccagcacctttctcattat
gaccaacatcaggtcacggctcaggtctcccggaatgttctggagcagattacgagtttt
gctcttggcatgtcataccacttgcctctggtgcagcatgtgcagttcgtcttcgacctc
atggaatattcactaagcatcagtggcctcatcgactttgccattcagctgctgaatgag
ctgagtgtggttgaggcagagctccttctcaaatcgtctgatctggtgggcagctatact
accagcctgtgcttatgcatcgtggctgtccttcgacactatcatgcctgcctcatcctc
aatcaagaccagatggcgcaagtgtttgaggggctctgtggcgtggtgaaacatggaatg
aaccgttcagatggctcctctgcagagcgctgtatccttgcttatctctatgatctgtat
acctcctgtagccatttaaagagcaaatttggggagctcttcagtgacttttgctcaaaa
gtgaagaacaccatctactgtaatgtggagccatcagaatccaatatgcgctgggcaccg
gagttcatgattgacactctggagaaccctgctgctcacactttcacctacacggggcta
ggcaagagtcttagtgagaaccctgccaaccgctacagctttgtctgcaatgctcttatg
cacgtctgtgtgggccaccatgatcctgatagggtaaatgacatcgctatcctttgtgca
gagctcaccggctattgcaagtcactgagtgcagagtggttaggagtacttaaggccttg
tgctgctcctctaacaatggcacttgtggtttcaacgatctcctgtgcaacgtagatgtc
agtgacttgtctttccacgattccctggctacttttgttgctatcctcatcgcccgtcag
tgtttgctcctagaagacctgattcgctgtgcagccatcccttcgctcctcaatgctgct
tgtagtgagcaggattctgagccaggggccaggcttacttgccgaattctcctccacctg
ttcaagacgccacaactcaatccttgccagtccgatggaaacaaacctaccgttggaatc
cggtcctcctgtgaccgccacctgctggctgcctcccagaaccgcatcgtggatggagct
gtgtttgctgttctcaaggctgtgtttgtactcggggatgcggagcttaaaggttcaggc
ttcactgtgccgggaggaacagaagaacttccagaagaggagggaggaggtggtagtagc
ggtcggaggcagggtggccgcaacatctctgtggagacagcaagtctggatgtctatgcc
aagtacgtgctgcgaagcatctgccaacaggaatgggtaggagaacgttgccttaagtca
ctgtgtgaggatagcaatgatctacaagacccagtgttgagtagtgcccaggcccagcgc
ctcatgcagctcatctgctacccacatcgactgctggacagcgaagatggagaaaacccc
cagcggcagcgcattaagcggattctcaagaacttagaccaatggaccatgcgccagtcc
tctttggagctacagctgatgatcaagcagacccccaacaccgagatgaactctctcttg
gagaacattgccaaggccacaattgaggttttccaacagtccgcagagacgggatcatcc
tctggcagtacagcaagcaatatgcccagcagcagcaaggccaaacctgtgctcagctct
ctggagcgctctggtgtatggttggtggctcctctcattgccaaactgcccacttcagtt
cagggccatgtattaaaagctgctggggaggaattggaaaagggtcagcacctgggttct
tcttcccggaaagaacgagatcgacaaaaacagaagagtatgtccctgttgagccagcag
cctttcttatcactggtgctaacatgtctgaaaggacaggatgaacaacgtgagggactc
cttgcctccctccacagccaggtgcaccagattgtgattaattggcgagaaaaccagtac
ttagatgattgcaaaccaaagcagctaatgcatgaggcactcaaactgcggctcaacctg
gtcgggggcatgtttgacactgtgcagcgtagtacccaacagactacagagtgggcccag
ctcctcctggagattatcatcagtggcactgtggatatgcagtctaacaatgaactcttc
actactgtgttggacatgctgagcgtgcttatcaatggaacgttggctgcagacatgtcc
agtatctcacaaggcagcatggaggaaaacaaacgtgcatatatgaacctggtgaagaag
cttcagaaggacttgggggagcgccaatcagacagtctggaaaaggttcaccaactgttg
ccactacccaagcagaaccgagatgtcataacctgtgagccacagggctcccttattgac
accaagggcaacaagattgctggcttcgattccatcttcaagaaggagggtctacaagtt
tccaccaaacaaaagatctctccttgggagctttttgagggcctgaagccatcaacagca
ccactatcatgggcctggtttggcacagtccgagtggaccgccgagtggcacgaggggag
gagcagcaacgactgttgctctaccatacccacctgaggcctcgacccagagcctattac
ctggagccactacctctgcccccagaagatgaggagccaccagcccctgccctactagag
cctgagaaaaaggctcctgagccccccaagactgacaaaccagggactgctcctcccagc
acagaggagcgcaagaagaaatctaccaagggcaagaaacgcagtcagccagccaccaag
agcgaggactatggcatggggccaggtcggagtggtccctatggtgtgacagtgcctcca
gaccttctacaccatgcaaatccaggttctatatcccaccttagctacaggcagagctcc
atgggcctgtacacccaaaaccagccactgcctgctggtggccctcgtgtggacccatat
cgccctgtgcgattaccaatgcagaagctgccaactcgaccaacttaccccggtgtgctg
cctacaactatgactactgtcatgggcctagaaccctcttcttataagacctctgtgtac
cggcagcagcaacccacagtgccccagggacagcgccttcgccaacagctccagcagagt
cagggaatgttgggacagtcatctgtccatcagatgactcctagttcttcctatggtttg
cagagttcccagggctatacgtcctatgtctctcatgtgggattgcagcaacacacaggc
cctgcaggtaccatggtgccccccagctactccagccagccttatcagagcacccaccct
tctaccaatcctactcttgtagatcctacccgtcacctgcaacagcggcccagtggctat
gtgcatcagcaggccccaacctatgggcatggactgacttccactcaaaggttttcacac
cagacactgcagcagacaccaatgatgggtaccatgactccgttgagtgcccagggtgtc
caggcaggcgtccgttcaacttccatcctgcctgagcagcaacaacagcaacaacagcag
cagcagcaacagcagcagcaacaacagcaacagcagcaacagcagcaacagcaacaacag
caacaacagcagtaccacatccgacagcaacaacagcaacagcagatcctaaggcaacag
cagcaacagcagcagcagcagcaacaacagcagcaacagcagcagcaacaacagcagcaa
caaccacaacagcagcagccacaccagcagcagcagcaggcagcacctccccaacctcaa
ccccagtcccagccccagttccagcgccaggggcttcagcagacccagcagcagcaacag
acagcagctttggtccggcaacttcaacaacagctctctaatacccagccacagcccagt
accaacatatttggacgctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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