KEGG   Rattus norvegicus (rat): 679898
Entry
679898            CDS       T01003                                 
Symbol
Zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
  KO
K12848  U4/U6.U5 tri-snRNP component SNU23
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    679898 (Zmat2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    679898 (Zmat2)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    679898 (Zmat2)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    679898 (Zmat2)
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz SNRNP27 zf-U1 Cgr1 DUF6277 DUF4250 Herpes_gp350_A zf-C2H2
Other DBs
NCBI-GeneID: 679898
NCBI-ProteinID: NP_001129054
RGD: 1583592
Ensembl: ENSRNOG00000016087
UniProt: A6J341 D4AD01
Position
18:28683617..28688252
AA seq 199 aa
MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPVQPVKRELLRHRDYKVDLES
KLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLD
QVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEE
DEMAAVMGFSGFGSTKKSY
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgtctggcagcgggacaaaaaacttggactttcgccgaaagtgggacaaagatgaa
tatgagaagctcgcggagaagagactcacagaagagagagaaaagaaggatggaaaacca
gtgcagccagttaagcgggagcttctacggcacagggattacaaggtggacttggagtcc
aagcttgggaagacaattgttatcaccaagaccaccccacagtctgaaatgggaggctac
tactgcaatgtctgtgactgtgtggtgaaggactccattaacttcctggatcacattaat
ggaaagaaacatcagcgaaacctgggtatgtctatgcgcgtggaacgttccactctggat
caggtaaagaaacgttttgaggttaacaagaagaagatggaggagaagcagaaagattat
gattttgaggaaaggatgaaggagctcagagaagaggaggaaaaggctaaagcatacaag
aaagagaaacagaaggagaagaaaaggagggccgaggaggacttgacttttgaggaggag
gatgaaatggcagctgtgatgggcttctctggctttggttctaccaagaagagttactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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