KEGG   Rattus norvegicus (rat): 680018
Entry
680018            CDS       T01003                                 
Symbol
Iho1
Name
(RefSeq) interactor of HORMAD1 protein 1 isoform X1
  KO
K26085  interactor of HORMAD1 protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    680018 (Iho1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    680018 (Iho1)
SSDB
Motif
Pfam: IHO1 ATG16
Other DBs
NCBI-GeneID: 680018
NCBI-ProteinID: XP_001055346
RGD: 1596869
Ensembl: ENSRNOG00000048919
UniProt: A6I352 M0R8J7
Position
8:complement(117969099..118005724)
AA seq 574 aa
MNFNVWNVKEMLSIPSGSGLTKPSNWNSNQTDCSSLSDSQFLFGSQFCPENSETLLPPLD
AGTYLRYPKQTQQNSVDNEPSIFTKYQAKPQLFGGDTKGEGLFSLPLPVGKPKGLSKQFE
EKKRRATDQSDSETLHNFVSHFPEVIHKLQTAVEKSEEHLSSRSQSILDSVETIAKTFQE
TARVQHDLMVEAVKDKGSVEQAVLEIQRACAARQAEFMEMKSTLKNLEVLVVQQSKDFQQ
FCDNLGQLIVPSVLGELKKFTSVPQVVGHLKDSASQTSPSLTQSHHYPRQEPYPSEEPAT
WQGQEPPAGNSSRGSQRPTEFGVWDEGAESDVFQKATLPTDRPHRGSEHVKGKAVQTYCK
NWVMTSRSLSNHFSVPDQKAGSEQDLTAPGASQLDCESEARVEGICPTYEAQSKCALDSF
EQSAAEQKRGRTCRKRRRGKKPQPRRAKRGRLLARVQKQTSGEACAITAERPCPQSSVCS
SQGPLICWPPLRSSTKSACHILGGRGETSMTAGAVQGSLLKSSQHSSTDSSSQEDQQINW
FSDISLENLEPPLCKKGGKNLLSDPDFDSSDDNF
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgaattttaatgtctggaatgtcaaagagatgctcagcatcccctcaggctctgggctc
actaaaccgtctaactggaatagtaatcagactgactgttcttctctcagtgattcccag
ttcctctttggatctcagttctgtcctgaaaattcagaaactctgttaccacccttggat
gctggcacttacttaagatacccaaaacagacacaacagaattctgtagataatgaacct
agtattttcacaaaataccaggcgaagccccagttgtttggaggcgatacaaaaggtgaa
ggcttattttctcttcctttgccagttgggaaaccaaaaggactctcaaaacagtttgag
gagaaaaaacgaagggcaaccgaccaatctgacagtgagacgctgcacaacttcgtttct
cattttccagaagtcatccacaagttgcagacagctgtggaaaagtctgaggaacatctc
agctctagaagccagtctattttagactctgtggagaccatagccaagacctttcaagag
actgcgagggttcagcatgacctgatggttgaggcagtgaaagacaaaggcagcgtggag
caggccgtccttgagatacagagggcatgtgcagctagacaagcagaatttatggagatg
aaatccaccctgaagaaccttgaagttttagttgtccagcagagtaaggacttccagcag
ttttgtgataatctgggccagctcattgtgcctagtgtcctaggagagctgaaaaaattc
acctctgttcctcaggtggttgggcatctgaaagacagcgcctctcagacctcaccatct
ctgacccagagccatcattatcccaggcaggaaccgtatccctctgaggagccagctact
tggcagggccaggagcctcctgcagggaattccagtaggggttcccagaggcctacagag
ttcggtgtctgggatgaaggagcagagagtgatgtttttcaaaaggctacattgccaaca
gacaggccccacagaggcagtgagcatgtgaagggcaaggccgtgcagacgtactgtaag
aactgggttatgacctccagaagcctcagtaaccacttctctgtcccagaccagaaggcc
ggcagcgagcaggatctgactgccccaggcgcctcacagctggactgtgagtctgaagcc
agagtggagggcatctgccccacatacgaggcccaaagcaagtgcgcccttgactcattt
gaacagtcagcagctgaacagaagagaggcaggacctgcagaaaaaggaggagaggcaag
aagccgcagccgaggcgagcaaagagaggcaggcttctagctagggtacaaaagcagacc
tcaggggaggcctgtgccatcacggccgagcgtccctgtccccagtcttcagtttgtagc
tcacaggggcccctcatctgttggccgcctctgaggagctccaccaagtcagcttgtcat
attttaggaggaagaggagagaccagtatgacagcaggggcagtgcaggggagcctcctg
aagtcttcccagcactcctccacagacagcagttcccaggaggaccagcagataaattgg
ttcagtgacatcagccttgaaaacctagagcctcctctgtgtaagaagggagggaagaat
ttgctctctgacccggattttgatagcagtgatgataatttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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