KEGG   Rattus norvegicus (rat): 680047
Entry
680047            CDS       T01003                                 
Symbol
Pcdhb9
Name
(RefSeq) protocadherin beta 9
  KO
K16494  protocadherin beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    680047 (Pcdhb9)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   680047 (Pcdhb9)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 REJ
Other DBs
NCBI-GeneID: 680047
NCBI-ProteinID: NP_001102860
RGD: 1596840
Ensembl: ENSRNOG00000020072
UniProt: F1LN21 A6J365
Position
18:29379310..29382480
AA seq 798 aa
MHFPIMEKLRKIHLNRQVMLFIFMMALVLVCSEATTRYSILEETESGSFVAHLAKDLGLG
AGELAARSARVVSDDYKQRLLLDPETGDLILREKLDREELCGSLDPCVLPFQVSLEKPVQ
YFQGELLIQDINDHAPEFPDRELLLKIPENSQPGTRFSLKLAQDLDVGNNGLQEYRVSTN
PHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLIALDGGSPPRSGTALVRILIIDI
NDNAPEFVNSPYEVQVLESCPPDSPILTVLARDADAGNFGSVSYGLFQASDEIQQTFSIN
ETTGDMRLKKKLDFEKIKSYHVEIEATDGGGLSGRGSVMIEVLDVNDNAPELTISSLTSS
VPENAPETIISIFRVGDRDSGENGKAVCSISENLPFILKSTFKNFYTLVTESPLDRESRA
EYNITISVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRENNSPALHIGTISA
TDADSGSNAHITYSLLPPQNPQLALVSLISINADNGQLFALRALDYEALQAFEFYVGATD
QGSPALSSQALVHVMVLDDNDNAPFVLYPLQNASAPCTELLPRAAEPGYLITKVVAVDCD
SGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLLLLVKDNGDPARSAT
VTLHVLLVDGFSQPYLPLPEVARNAVQEDDDALTLYLVIALASVSSLFLLSVLLFVGVRL
CRRGREVSLGGCSIPDGHFPGHLVDVSGAGTLSQSYQYEVCLRGDSGTGEFKFLKPMVPN
AGIEIMESPHCRESFVFN
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgcacttccccatcatggagaagctgaggaagattcacctaaacaggcaagtaatgctg
tttatttttatgatggctttggttctggtttgcagtgaggcaacaactcgatactctatt
ttagaggaaacagaaagtggctcctttgtggcccatctggccaaggatctgggtctggga
gctggggagctggctgccaggtctgcacgggtggtgtctgatgattacaagcagagattg
ctgctggatcctgagactggagatttgattctgagagagaaactagaccgggaagagctg
tgtggctctttggatccctgtgtgctgcctttccaggtgtctcttgaaaagccagtgcaa
tattttcaaggagaattattgatccaggacataaatgatcatgctccagaattcccagat
agagaattgctcttgaaaattccggaaaacagccagccaggcacacgattttcattgaaa
ttagcccaggatttggatgtgggcaacaatgggcttcaagagtacagagtcagcaccaac
cctcattttcatgtcctcactcgaaataatagtgaaggcaagaaatacccagagttggtg
caggacagagccctggacagagaggagcaggcagagctgagcttaaccctcatagctctg
gatggcgggtctccaccgaggtcaggaacagccttggttcgaatcctgatcatagacatc
aatgacaatgctcctgagtttgtgaacagcccctatgaggtgcaggttctagagagctgt
cccccagactccccaatcctgactgtgttagcacgggatgcagatgctggcaactttggg
agtgtttcctatggcttgttccaagcatcagatgaaatccaacaaacattctcaataaac
gaaactactggagacatgcgactgaaaaagaaattggattttgaaaaaattaaatcttat
catgtggaaatcgaggccacagacggaggagggctttctgggagaggttctgtgatgata
gaggtgttggatgtgaacgacaatgctccagagctgaccatatcttcactgaccagctca
gtcccagaaaatgctcctgagaccataatcagcatcttcagagttggagacagggattcc
ggagagaatggaaaggcggtttgctctatctcagaaaacctgccattcattctaaaatcc
actttcaagaatttctacactctggtgacagagagccctctggacagagagagtagagct
gaatacaacatcaccatctcagtctcagacctgggcacacccaggctcacaacccagcac
accataacagtgcaggtgtctgacatcaacgacaacgcccctgccttcacccaaacctcc
tacaccatgtttgtccgcgagaacaacagccctgccctgcacataggcaccatcagtgcc
acagatgcagactcaggctccaatgcccacatcacctactcactgctgccgccccaaaat
ccacagctggcccttgtctcgctcatctccatcaacgcagacaatgggcagctgttcgcg
ctcagggcgctggactatgaggccctgcaggccttcgaattctatgtgggtgccacagac
caaggttcaccagcgctcagcagccaggctctggtgcatgtgatggtgctggacgacaat
gacaatgcgcccttcgtgctctacccgctgcagaacgcctctgcaccctgcaccgagctg
ctccccagggcagcggagccaggatacctgatcaccaaggttgtggctgtggactgcgac
tctggccagaatgcctggctgtcattccagttgctcaaggccacagagcccgggttgttt
agcgtgtgggcacacaatggcgaggtacgcaccaccaggctgctgagcgagcgagatgtg
cccaagcacaggctacttctgctggtcaaggacaatggggaccctgcgcgctctgccaca
gtcacgttgcacgtgctacttgtggatggattttcacagccctatctgcctctgccggaa
gttgctcggaacgccgttcaggaagatgatgatgctcttacactgtacctggtcatagcc
ttggcatctgtgtcttctctcttcctcttgtctgtgctgctgtttgtgggggtgaggctg
tgcaggaggggcagagaggtctctctgggtggctgctctattcctgatggacactttcct
ggccacctggtggatgtcagtggagcagggaccctgtcccaaagttaccagtatgaggtg
tgtctgaggggagactctgggactggtgagttcaagttcctgaaacccatggtccccaat
gctgggatagaaattatggaaagtccccactgcagggaaagctttgtattcaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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