KEGG   Rattus norvegicus (rat): 680050
Entry
680050            CDS       T01003                                 
Symbol
Tbpl2
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    680050 (Tbpl2)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    680050 (Tbpl2)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    680050 (Tbpl2)
   05165 Human papillomavirus infection
    680050 (Tbpl2)
  09164 Neurodegenerative disease
   05016 Huntington disease
    680050 (Tbpl2)
   05017 Spinocerebellar ataxia
    680050 (Tbpl2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    680050 (Tbpl2)
   03021 Transcription machinery [BR:rno03021]
    680050 (Tbpl2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    680050 (Tbpl2)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     680050 (Tbpl2)
  RNA polymerase III system
    TFIIIB
     680050 (Tbpl2)
  RNA polymerase I system
    SL1/TIF-1B
     680050 (Tbpl2)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 680050
NCBI-ProteinID: NP_001092831
RGD: 1596837
Ensembl: ENSRNOG00000033682
UniProt: A6H909
Position
3:complement(27170209..27191665)
AA seq 344 aa
MEEDMYVDIFLDPYTFQDDFPPATSQLFSPGAPLDVHPLNPSNPETVFHSHLGAVKKAPS
DFSSVDLSFLPDELTQENKDRTVTGNKVTNEESFRTQDWQSQLQLPDEQGSGLNLNSNSS
PDTQSCLCSHDADSNQLSSETPNSNALPVVLISSMTPMNPVTECSGIVPQLQNVVSTANL
ACKLDLRKIALNAKNTEYNPKRFAAVIMRIREPRTTALIFSSGKVVCTGAKSEDESRLAA
RKYARVVQKLGFPVRFFNFKIQNMVASCDVKFPIRLEILALTHRQFSSYEPELFPGLIYK
MVKPQVVLLIFASGKVVLTGAKERSEIYEAFENMYPILESFKKV
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggaggaggacatgtacgtggacattttcctggacccttataccttccaggatgacttt
cctccagctacgtctcaactattcagcccaggagcgcctttagatgtgcacccacttaat
ccatccaatccagagactgtatttcattcacatcttggtgcagtcaaaaaggcacccagt
gacttttcatctgtggatctaagcttcttaccagatgaacttacccaagaaaataaagac
cgaactgtcactggaaacaaagtcacaaatgaggaaagctttaggactcaagattggcaa
agtcagttgcagttgcctgatgaacaaggcagtgggctgaacttgaatagcaacagttca
ccagatacccagtcatgtctgtgctctcatgatgctgactccaaccagctctcttcagaa
acaccaaattccaatgccttacctgtggtattgatatcatccatgacaccaatgaaccct
gttacagaatgttctggaattgtgcctcaattacagaatgtagtttccactgcaaatctg
gcctgtaaattggatctgagaaaaatagctttgaatgccaaaaacacagaatataatcca
aagaggtttgctgcagtcataatgaggatccgagagccaaggaccacagctcttatattt
agctctgggaaagtggtctgtacaggagccaaaagtgaagacgagtctcggctggcagca
agaaagtatgctcgcgtggtgcagaagctggggttccccgtcagattcttcaattttaaa
attcagaacatggttgcaagctgtgatgtgaaatttcccatcaggctggagattttggca
ctaacccatcggcagttcagtagttatgagcctgaactgttccctggccttatttataag
atggtgaaaccgcaggttgtgctgctcatctttgcatctggaaaggttgtactgacaggt
gccaaagagcgttctgagatctacgaagcatttgaaaacatgtatcctattctagaaagt
tttaagaaagtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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