KEGG   Rattus norvegicus (rat): 680111
Entry
680111            CDS       T01003                                 
Symbol
Rbl1
Name
(RefSeq) retinoblastoma-like protein 1
  KO
K04681  retinoblastoma-like protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04110  Cell cycle
rno04218  Cellular senescence
rno04350  TGF-beta signaling pathway
rno05165  Human papillomavirus infection
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    680111 (Rbl1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    680111 (Rbl1)
   04218 Cellular senescence
    680111 (Rbl1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    680111 (Rbl1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    680111 (Rbl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    680111 (Rbl1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    680111 (Rbl1)
SSDB
Motif
Pfam: RB_A RB_B DUF3452 Rb_C TFIIB
Other DBs
NCBI-GeneID: 680111
NCBI-ProteinID: NP_001177995
RGD: 1595511
Ensembl: ENSRNOG00000006921
UniProt: D3ZS28
Position
3:complement(166226187..166289862)
AA seq 1063 aa
MFEDEPHAEGAAAVAAAREALQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVIHWLA
CSLYVACRKSIIPTVGKGVMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMSNLPQEFRE
RIERLERNFEVSTVIFKKFEPIFLDIFQNPYEELPKLPRSRKQRRIPCSVKDLFNFCWTL
FVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANAIMCPNRRDLLNPSFKGLPSDFHAVNFK
AAEEPPCIIAVLCDLHDGLLVEAKGIKEHYFKPYISKLFDKKILKGECLLDLSSFTDNSK
AVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFAADTQFGKLTSQASVDCNLQQHFE
KKRSFAPSTPLTGRRYLQEKEAVTTPVASATQSVSRLQSIVAGLKSAPSEQLLTIFESCM
RNPMGNIVKIVKGIGETFCQHYTQSTDKQPGSHIDFAVNRLKLAEILYYKILETIMVQET
RRLHGMDMSVLLEQDIFHRSLLACCLEIVLFAYSSPRTFPWIIDVLGLQPFYFYKVIEVV
IRSEEGLSRDMVKHLNSIEEQILESLAWTNNSALWEALRASANKVPSCEEVIFPNNFEIG
NGGSVQGHLPMMPMSPIIHPRVKEVRTDSGSLRKDMQPLSPISVHERYSSPAAGSAKRRL
FGDDPPKETLMEKIMAEGTQLKIAPSSVTAESLSISPGQALLTMATTTVTGTTGRKVTVP
LHGIANDAGEITLVPISMNTTQDSTAESLVSLTAQSLIGASPKQTHLTKTQDAPLTGISK
PKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLD
QLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPGEVVAYNGDYEMT
DGDIEDATKTPNCSSEPVKEERGDLIKFYNAIYVGRVKSFALKYDLSNQDHIMDAPPLSP
FPHIKQQPGSPRRISQQHSIYVSPHKNASGLTPRSALLYKFNGSPSKSLKDINNMIRQGE
QKAKKRVIAISGDAESPAKRLCQENDDVLLKRLQDVVSERANH
NT seq 3192 nt   +upstreamnt  +downstreamnt
atgttcgaggacgagccccacgccgagggggcggcagccgtcgccgcggccagggaggcg
ctgcaggccctgtgccaggagctgaacctggacgaggggagcgccgccgaagccctggac
gacttcaccgccatccgcggcaactacagcctagagggggaagttatacactggctggca
tgctctttgtacgtcgcttgccgcaagagcatcattcctaccgtgggaaagggcgtcatg
gaaggaaactgtgtttcgctgaccagaatactacgctcagctaagttaagcttaattcag
ttttttagtaaaatgaagaagtggatggacatgtcaaacctaccacaagaattccgggag
cgtatagaaaggctagaaagaaattttgaagtatctacagtaatttttaaaaaatttgag
cccatttttttagatatctttcaaaatccatatgaagagctaccaaagttgccacgaagc
agaaagcagaggaggattccttgcagtgttaaggatctctttaatttctgctggacgctc
ttcgtttacactaagggtaattttcgtatgattggtgatgatttagtaaactcatatcat
ttacttctgtgctgcttggacctgatttttgccaatgctataatgtgtccaaatagacga
gacttgttaaatccatcatttaaaggtttaccatcggatttccatgctgtgaacttcaaa
gctgcagaagaaccaccctgtatcattgctgtactttgcgatctgcacgatggactttta
gtagaagcaaaaggaataaaggagcactacttcaaaccatatatttcaaaactctttgac
aagaagattttaaaaggtgaatgtctcttggatctttccagttttactgataatagcaaa
gcagtgaacaaggagtatgaagagtatgttctaactgttggggactttgacgagaggatc
tttttgggagcagatgcagaggaggagatcggaacacctcgaaagttcgctgctgacacc
caatttgggaaactgacatcacaggccagtgtggactgcaaccttcaacaacactttgaa
aaaaaacggtcatttgcaccttctaccccacttactggacggcgctatttacaagaaaaa
gaggcagttaccacacctgttgcttcagctactcagagtgtaagccgattacagagcatt
gtagccggattgaaaagtgccccgagcgagcagcttctgactatttttgaatcttgtatg
cggaatccgatgggaaacattgtaaaaatagtgaaaggaataggagagactttctgccag
cactatacccagtccacagataaacagccaggatctcacatagactttgctgtaaacaga
ctgaaactggcagaaattttgtattataaaatactagagactataatggtccaggaaaca
cgacgacttcatggaatggacatgtcagttcttttagaacaagacatatttcacaggtcc
ttgctggcttgttgtttggaaattgtgctctttgcctatagctcaccccgtactttccct
tggatcattgacgttctcggtttgcagccgttttacttctataaggttattgaggtggtg
atccgctcagaggaggggctctccagagacatggtgaaacacctaaacagcattgaagag
cagattttggagagtttagcttggactaataattctgcactgtgggaagctctccgtgct
tctgcaaataaagttccttcctgtgaagaagttatattcccaaataactttgaaatagga
aatggaggaagtgtgcaaggccatcttcccatgatgccaatgtctccaataatacatcca
agagtcaaggaagttcgcactgacagtgggagccttcgaaaagatatgcagccactgtct
cccatctccgtccatgagcgctacagctcccctgccgcaggaagtgctaagaggagactc
tttggtgatgacccaccaaaggagacattgatggaaaagattatggcagaaggaacacag
ctgaaaattgctccttcaagtgtgactgctgaaagcttgtcaatttcccctgggcaagct
cttctcacaatggccacgaccacagtcacagggacgacgggacggaaggttaccgttcct
ttgcatggtattgccaatgatgctggagaaatcacactggttcctatttccatgaataca
actcaggactccacagctgagagccttgtatcactaactgcacagtcattaattggtgct
tctccaaaacagacccatctgactaaaacgcaagacgctcctctgaccggaataagcaaa
ccaaagagaactgggtccttagcactgttttatagaaaggtctatcatttggcaagtgta
cgcttacgtgatttatgtttaaaacttgatgtttcgaatgagttacgaaggaagatctgg
acatgttttgaattcactttagttcactgccctgatttaatgaaagataggcatttggat
cagctccttctgtgtgccttttacatcatggccaaagtaacaaaagaagaaagaactttt
caagaaataatgaaaagttacagaaatcagccacaagctaatagtcacgtatacaggagt
gttctcttgaaaagtattccaggagaagttgtggcatacaatggtgactatgagatgact
gatggtgacatagaagatgccacaaaaactcccaactgttccagtgaaccagtgaaagag
gaaagaggtgatcttatcaaattctacaatgcgatatatgtaggaagagtgaagtcattt
gcattgaagtatgatttgtccaatcaggaccatataatggatgctccaccgctctctcct
ttcccacatattaagcagcagccgggctccccacgccgcatttctcagcagcattccatt
tatgtctctccgcacaagaacgcatcaggcctcacccccaggagcgcactactctacaag
ttcaacggcagcccctctaagagtttgaaagacatcaacaacatgataaggcaaggtgag
cagaaggccaagaagcgtgtgatcgccatcagcggagatgcagagtcacctgccaaacgt
ctctgccaggagaacgatgatgttttacttaaacgactgcaggatgttgtcagtgaaaga
gcgaatcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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