KEGG   Rattus norvegicus (rat): 680178
Entry
680178            CDS       T01003                                 
Symbol
Cldn20
Name
(RefSeq) claudin-20 precursor
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    680178 (Cldn20)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    680178 (Cldn20)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    680178 (Cldn20)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    680178 (Cldn20)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    680178 (Cldn20)
   04147 Exosome [BR:rno04147]
    680178 (Cldn20)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   680178 (Cldn20)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   680178 (Cldn20)
  Exosomal proteins of colorectal cancer cells
   680178 (Cldn20)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DUF981 Clc-like
Other DBs
NCBI-GeneID: 680178
NCBI-ProteinID: NP_001102864
RGD: 1595446
Ensembl: ENSRNOG00000023531
UniProt: A6KIQ7 D3ZT28
Position
1:46539039..46539698
AA seq 219 aa
MASAGLQLLAFILAVSGVSGVLAATLLPNWKVNADAGSTIVTAIVQVHGLWMDCTWYSTG
MFSCTLKYSILSLPVYVQAARATMVLACILSALGICTAIVGMKCTHLGGDAHTKSHISFA
GGVCFITAGISALIPTVWYTKEIISNFLDLTVPESHKYEPGGAVYIGFISAMLLLIAGII
FCISYIKKNQEPWIYPPKQRLTSTWQPKNRLAYNLKDYV
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcctcggccggtctccagctcctggctttcatcctggctgtgtctggggtctctgga
gtacttgctgccactctgctgccaaactggaaggttaatgcagatgcaggctccaccatt
gtaactgctattgtacaggtacatgggttgtggatggactgcacgtggtacagcactggg
atgtttagctgcactctgaaatactccattctgtcgctccccgtctatgtgcaggctgcg
agggctaccatggtcctggcctgcattctgtctgccttggggatttgtactgcgatagta
ggaatgaaatgcactcacttaggaggagacgcacacaccaagagtcacatttcctttgct
ggaggagtctgcttcatcaccgcagggatctctgctttaatcccaacagtgtggtacacc
aaagagatcatatccaactttttggatctgactgttccagaaagccacaaatatgaacct
ggaggagccgtgtacattgggttcatttcagcgatgttactacttatcgctggtattatt
ttctgcatttcttatataaaaaagaaccaagaaccatggatctaccctcccaagcagaga
cttacctctacctggcagccaaagaacaggttagcatacaacctgaaggattatgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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