KEGG   Rattus norvegicus (rat): 680309
Entry
680309            CDS       T01003                                 
Symbol
Snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    680309 (Snrpd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    680309 (Snrpd2)
   03032 DNA replication proteins [BR:rno03032]
    680309 (Snrpd2)
Spliceosome [BR:rno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    680309 (Snrpd2)
  U2 snRNP components
    680309 (Snrpd2)
 Complex B
  U1 snRNP components
    680309 (Snrpd2)
  U4/U6.U5 tri-snRNP components
    680309 (Snrpd2)
 Complex C
  U2 snRNP components
    680309 (Snrpd2)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     680309 (Snrpd2)
SSDB
Motif
Pfam: LSM Hfq NUMOD4 GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 680309
NCBI-ProteinID: NP_001102869
RGD: 1593018
Ensembl: ENSRNOG00000015844
UniProt: B5DES0
Position
1:87926030..87929259
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtctcctcaataaacccaagagtgagatgaccccagaggagctgcagaagcgggag
gaggaggaattcaacacaggtcccctctcggtgctcacacagtcggtcaaaaacaacacg
caagtgctcattaactgtcgaaacaacaagaagctcctgggccgggtgaaggcctttgac
aggcactgcaacatggtgctggaaaatgtgaaggagatgtggactgaggtccccaagagc
ggcaagggcaagaagaagtccaagcctgtcaacaaggaccgctacatctccaagatgttc
ctgcgcggggactcagtcattgtggtgctgcggaacccgctcatcgctggcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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