KEGG   Rattus norvegicus (rat): 680737
Entry
680737            CDS       T01003                                 
Symbol
Snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    680737 (Snrpf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    680737 (Snrpf)
   03041 Spliceosome [BR:rno03041]
    680737 (Snrpf)
   03032 DNA replication proteins [BR:rno03032]
    680737 (Snrpf)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     680737 (Snrpf)
Spliceosome [BR:rno03041]
 Complex A
  U1 snRNP components
   Sm proteins
    680737 (Snrpf)
  U2 snRNP components
    680737 (Snrpf)
 Complex B
  U1 snRNP components
    680737 (Snrpf)
  U4/U6.U5 tri-snRNP components
    680737 (Snrpf)
 Complex C
  U2 snRNP components
    680737 (Snrpf)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     680737 (Snrpf)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 680737
NCBI-ProteinID: NP_001119563
RGD: 1588229
Ensembl: ENSRNOG00000005556
UniProt: A6IFZ1 D4AAT4
Position
7:complement(30017460..30024162)
AA seq 86 aa
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagtttacccctcaatcccaagccttttctcaatggactgacaggaaagccagtgatg
gtgaaacttaagtggggcatggagtacaagggctacctggtctccgttgatggctacatg
aacatgcagcttgcaaatacagaagaatacatagatggggcattgtctggacatctgggt
gaagttctaataaggtgtaataatgtcctctacatcagaggtgtcgaagaggaggaggaa
gatggggagatgagagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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